Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 2 | 5.39 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BLOECCNK_75 | 134087 | 135463 | tet(L) | ARO:3000179 | tet(L) | 98.69 | 100.00 | M11036.1 |
| BLOECCNK_75 | 131974 | 133893 | tet(M) | ARO:3000186 | tet(M) | 98.75 | 100.00 | AB039845.1 |
| BLOECCNK_106 | 7264 | 8127 | ANT(6)-Ia | ARO:3002626 | ANT(6)-Ia | 100.00 | 100.00 | KF648874.1 |
| BLOECCNK_145 | 1820 | 2554 | ErmA | ARO:3000347 | ErmA | 85.19 | 100.41 | X03216.1 |
| BLOECCNK_158 | 1152 | 1646 | lnuC | ARO:3002837 | lnuC | 98.17 | 100.00 | AY928180.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BLOECCNK_106 | 7264 | 8127 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF421157 |
| BLOECCNK_75 | 134087 | 135463 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.71 | 100.00 | AY081910 |
| BLOECCNK_145 | 1820 | 2545 | erm(A) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.59 | 99.18 | EU348758 |
| BLOECCNK_75 | 131974 | 133893 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.06 | 100.00 | AM990992 |
| BLOECCNK_158 | 1152 | 1646 | lnu(C) | Lincomycin | 98.79 | 100.00 | AY928180 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BLOECCNK_106 | 7267 | 8127 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | EXACTX | 100.00 | 100.00 | WP_002294505.1 |
| BLOECCNK_75 | 131974 | 133890 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.37 | 100.00 | WP_000691727.1 |
| BLOECCNK_75 | 134087 | 135460 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_002294500.1 |
| BLOECCNK_158 | 1152 | 1643 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 98.17 | 100.00 | WP_063851341.1 |
| BLOECCNK_145 | 1820 | 2548 | erm(A) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) | BLASTX | 85.19 | 100.00 | WP_001072197.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BLOECCNK_141 | 20014 | 19307 | WalR | 2.33e-117 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| BLOECCNK_44 | 26890 | 26693 | CspR | 7.06e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| BLOECCNK_44 | 26890 | 26696 | CspA | 3.44e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BLOECCNK_1 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_3 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_4 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_5 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_7 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_8 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_9 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_10 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_11 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_12 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_13 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_14 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_15 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_16 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_17 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_18 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_22 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_33 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_44 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_55 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_66 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_71 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_72 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_73 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_74 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_75 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_76 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_77 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_78 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_79 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_80 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_81 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_82 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_83 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_84 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_85 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_86 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_87 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_88 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_89 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_90 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_91 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_92 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_93 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_94 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_95 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_96 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_97 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_98 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_99 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_100 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_101 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_102 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_103 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_104 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_105 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_106 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_107 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_108 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_109 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_110 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_111 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_112 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_113 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_114 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_115 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_116 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_117 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_118 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_119 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_120 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_121 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_122 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_123 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_124 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_125 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_126 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_127 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_128 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_129 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_130 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_131 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_132 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_133 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_134 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_135 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_136 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_137 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_138 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_140 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_141 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_142 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_143 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_144 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_145 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_146 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_147 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_148 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_150 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_151 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_152 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_153 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_154 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_155 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_156 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_157 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_158 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_159 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_160 | 0.0 | 1.0 | 0.0 |
| BLOECCNK_161 | 1.0 | 0.0 | 1.0 |
| BLOECCNK_162 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BLOECCNK_75 | 84096 | 100026 | False | Myoviridae / Siphoviridae | VOG0105, VOG5722, VOG0377, VOG5721, VOG6031, VOG6524, VOG6246, VOG6941, VOG1026, VOG6036, VOG7629, VOG10223, VOG3390, VOG4705, VOG6940 |
Phigaro v2.4.0 (Database: Jan. 2024 release)