Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BFBONMMO_1 | 2680823 | 2681527 | WalR | 1.89e-113 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BFBONMMO_4 | 1720 | 2817 | repUS73 | 1101 / 1101 | 93.91 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BFBONMMO_1 | 0.0 | 1.0 | 0.0 |
| BFBONMMO_2 | 1.0 | 0.0 | 1.0 |
| BFBONMMO_3 | 1.0 | 0.0 | 1.0 |
| BFBONMMO_4 | 1.0 | 0.0 | 1.0 |
| BFBONMMO_5 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BFBONMMO_1 | 194982 | 221985 | False | Siphoviridae | VOG3480, VOG4567, VOG0044, VOG0044, VOG3643, VOG1049, VOG0198, VOG1714, VOG1183, VOG0638, VOG0796, VOG10227, VOG0720, VOG4564, VOG10914, VOG1329, VOG4713, VOG9583, VOG0724, VOG0799, VOG0725, VOG6163, VOG0801, VOG3462, VOG7548, VOG4904, VOG4626, VOG4334, VOG7896, VOG9955 |
| BFBONMMO_1 | 251377 | 285497 | False | Siphoviridae | VOG11003, VOG6495, VOG0181, VOG7298, VOG1309, VOG0186, VOG4566, VOG4693, VOG0198, VOG0796, VOG4544, VOG0720, VOG7038, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498, VOG8294 |
| BFBONMMO_1 | 1184231 | 1206690 | False | Siphoviridae | VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581 |
| BFBONMMO_1 | 1417585 | 1444850 | False | Siphoviridae | VOG4599, VOG4605, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG10904, VOG4841, VOG1315, VOG0198, VOG3643, VOG0044, VOG0044, VOG5883, VOG1551, VOG10015, VOG6005, VOG0189, VOG4799, VOG0514 |
| BFBONMMO_1 | 1539132 | 1571211 | False | Siphoviridae | VOG4705, VOG4334, VOG4626, VOG3462, VOG0801, VOG6163, VOG0725, VOG0799, VOG0724, VOG9583, VOG4713, VOG1329, VOG10914, VOG4564, VOG0720, VOG10227, VOG0796, VOG1183, VOG1315, VOG0198, VOG9671, VOG0044, VOG6970, VOG1297, VOG3468, VOG3480, VOG0327, VOG0189, VOG5046, VOG0535, VOG2703, VOG3549, VOG6495, VOG9667, VOG0862 |
| BFBONMMO_1 | 2671509 | 2677858 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG4544, VOG4556 |
| BFBONMMO_1 | 3215936 | 3241165 | False | Siphoviridae | VOG5878, VOG0198, VOG3699, VOG4544, VOG0691, VOG0692, VOG4555, VOG4572, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4910, VOG0801, VOG4619, VOG3463, VOG1637, VOG4626, VOG4334, VOG7896, VOG9955, VOG4705 |
Phigaro v2.4.0 (Database: Jan. 2024 release)