Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PIHCMCBM_144 | 88140 | 89720 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PIHCMCBM_1 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_2 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_3 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_4 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_5 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_6 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_7 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_8 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_9 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_10 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_11 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_12 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_13 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_14 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_15 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_16 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_17 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_18 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_19 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_20 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_21 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_22 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_23 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_24 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_25 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_26 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_27 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_28 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_29 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_30 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_31 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_32 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_33 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_34 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_35 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_36 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_37 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_38 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_39 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_40 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_41 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_42 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_43 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_44 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_45 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_46 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_47 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_48 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_49 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_50 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_51 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_52 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_53 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_54 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_55 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_56 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_57 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_58 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_59 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_60 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_61 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_62 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_63 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_64 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_65 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_66 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_67 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_68 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_69 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_70 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_71 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_72 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_73 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_74 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_75 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_76 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_77 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_78 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_79 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_80 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_81 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_82 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_83 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_84 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_85 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_86 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_87 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_88 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_89 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_90 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_91 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_92 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_93 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_94 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_95 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_96 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_97 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_98 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_99 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_100 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_101 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_102 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_103 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_104 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_105 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_106 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_107 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_108 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_109 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_110 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_111 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_112 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_113 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_114 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_115 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_116 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_117 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_118 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_119 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_120 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_121 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_122 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_123 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_124 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_125 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_126 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_127 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_128 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_129 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_130 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_131 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_132 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_133 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_134 | 1.0 | 0.0 | 1.0 |
| PIHCMCBM_135 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_136 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_137 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_138 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_139 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_140 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_141 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_142 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_143 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_144 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_145 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_146 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_147 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_148 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_149 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_150 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_151 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_152 | 0.0 | 1.0 | 0.0 |
| PIHCMCBM_153 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PIHCMCBM_1 | 3177 | 20598 | False | Siphoviridae | VOG1517, |
| PIHCMCBM_50 | 72228 | 80342 | False | Unknown | VOG0572, |
| PIHCMCBM_70 | 71058 | 77969 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)