Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OGBMJMDC_50 | 15720 | 16424 | WalR | 3.85e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| OGBMJMDC_32 | 6986 | 7180 | CspR | 2.68e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| OGBMJMDC_32 | 6986 | 7183 | CspA | 4.11e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OGBMJMDC_1 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_2 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_3 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_4 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_5 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_6 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_7 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_8 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_9 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_10 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_11 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_12 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_13 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_14 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_15 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_16 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_17 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_18 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_19 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_20 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_21 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_23 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_24 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_25 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_26 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_27 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_28 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_29 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_30 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_31 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_32 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_33 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_34 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_35 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_36 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_37 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_38 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_39 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_40 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_41 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_42 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_43 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_44 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_45 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_46 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_47 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_48 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_49 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_50 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_51 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_52 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_53 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_54 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_55 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_56 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_57 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_58 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_59 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_60 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_61 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_62 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_63 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_64 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_65 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_66 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_67 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_68 | 1.0 | 0.0 | 1.0 |
| OGBMJMDC_69 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_70 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_71 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_72 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_73 | 0.0 | 1.0 | 0.0 |
| OGBMJMDC_74 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OGBMJMDC_1 | 31118 | 35313 | False | Unknown | VOG0321, VOG4548, VOG0322, VOG6545 |
| OGBMJMDC_35 | 92902 | 100626 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568 |
| OGBMJMDC_35 | 121132 | 145742 | False | Siphoviridae | VOG9295, VOG0796, VOG4544, VOG0720, VOG4564, VOG3434, VOG1887, VOG4713, VOG1330, VOG1353, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498, VOG8294 |
| OGBMJMDC_40 | 66987 | 86062 | False | Siphoviridae | VOG0602, VOG9888, VOG8917, VOG9997, VOG3498, VOG4619, VOG0801, VOG6163, VOG0541, VOG7168, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556 |
| OGBMJMDC_44 | 54174 | 81250 | False | Siphoviridae | VOG3443, VOG1191, VOG1521, VOG0054, VOG0753, VOG8294, VOG6540, VOG9998, VOG10957, VOG4599, VOG4605, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886 |
| OGBMJMDC_51 | 24213 | 30544 | False | Siphoviridae | VOG4581, VOG1886, VOG3644, VOG4556, VOG4568, VOG0204 |
Phigaro v2.4.0 (Database: Jan. 2024 release)