Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OHIADEBO_64 | 75375 | 75178 | CspA | 2.41e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| OHIADEBO_64 | 75375 | 75181 | CspR | 1.05e-27 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OHIADEBO_10 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_11 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_12 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_13 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_14 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_15 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_16 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_17 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_18 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_19 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_20 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_21 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_22 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_23 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_24 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_25 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_26 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_27 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_28 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_29 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_30 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_31 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_32 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_33 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_34 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_35 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_36 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_37 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_38 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_39 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_40 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_41 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_42 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_43 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_44 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_45 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_46 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_47 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_48 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_49 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_50 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_51 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_52 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_53 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_54 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_55 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_56 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_57 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_58 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_59 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_60 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_61 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_62 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_63 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_64 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_65 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_66 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_67 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_68 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_69 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_71 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_72 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_73 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_74 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_75 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_76 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_77 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_78 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_79 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_80 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_81 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_82 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_83 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_84 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_85 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_86 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_87 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_89 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_90 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_91 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_92 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_93 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_94 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_95 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_96 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_97 | 0.0 | 1.0 | 0.0 |
| OHIADEBO_98 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_99 | 1.0 | 0.0 | 1.0 |
| OHIADEBO_108 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OHIADEBO_20 | 39556 | 75391 | False | Siphoviridae | VOG4615, VOG0703, VOG9091, VOG8917, VOG10223, VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0198, VOG0536, VOG0189, VOG0226, VOG0186, VOG1309, VOG2228, VOG4552, VOG9667, VOG7581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)