Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BMJEOMLG_27 | 10932 | 10735 | CspR | 3.51e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| BMJEOMLG_27 | 10932 | 10735 | CspA | 6.54e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BMJEOMLG_1 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_2 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_4 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_11 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_14 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_15 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_16 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_17 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_18 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_19 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_20 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_21 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_22 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_23 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_24 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_25 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_26 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_27 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_28 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_29 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_30 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_31 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_32 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_33 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_34 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_35 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_36 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_37 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_38 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_39 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_40 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_41 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_42 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_43 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_44 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_45 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_46 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_47 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_48 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_49 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_50 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_51 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_52 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_53 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_54 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_55 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_56 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_57 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_58 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_59 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_60 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_61 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_62 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_63 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_64 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_65 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_66 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_67 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_68 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_69 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_70 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_71 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_72 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_73 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_74 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_75 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_76 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_77 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_78 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_79 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_81 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_82 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_83 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_84 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_86 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_87 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_88 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_89 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_90 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_92 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_94 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_96 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_97 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_99 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_100 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_102 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_103 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_104 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_105 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_106 | 1.0 | 0.0 | 1.0 |
| BMJEOMLG_108 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_110 | 0.0 | 1.0 | 0.0 |
| BMJEOMLG_111 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BMJEOMLG_34 | 10872 | 43378 | False | Siphoviridae | VOG9667, VOG4552, VOG2228, VOG3929, VOG1309, VOG0186, VOG0226, VOG4799, VOG0198, VOG7911, VOG4841, VOG4581, VOG1886, VOG10142, VOG4556, VOG4568, VOG0204, VOG0205, VOG4317, VOG0207, VOG4586, VOG0209, VOG0006, VOG0801, VOG3462, VOG10972, VOG10972, VOG0565, VOG9997, VOG10899, VOG4687, VOG8917 |
| BMJEOMLG_45 | 10072 | 38086 | True | Siphoviridae | VOG7438, VOG1047, VOG0021, VOG0026, VOG4552, VOG4606, VOG4548, VOG0198, VOG8909, VOG4581, VOG4571, VOG7439, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG4589, VOG0641, VOG9502, VOG2576, VOG0221, VOG0221, VOG0221, VOG4567 |
| BMJEOMLG_89 | 12261 | 34351 | False | Myoviridae / Siphoviridae | VOG1292, VOG10457, VOG1176, VOG8295, VOG0025, VOG6085, VOG0226, VOG0205, VOG0384, VOG0382, VOG0083, VOG5235 |
Phigaro v2.4.0 (Database: Jan. 2024 release)