Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BINMEOML_20 | 34160 | 35062 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
| BINMEOML_72 | 2449 | 4422 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 100.00 | Z21523.1 |
| BINMEOML_73 | 2447 | 4420 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BINMEOML_72 | 2497 | 4422 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| BINMEOML_20 | 34160 | 35062 | cepA | Unknown Beta-lactam | 99.78 | 100.00 | L13472 |
| BINMEOML_20 | 117 | 1334 | mef(A) | Erythromycin, Azithromycin | 95.16 | 100.00 | AF227520 |
| BINMEOML_20 | 1455 | 2905 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 94.69 | 99.11 | AF274302 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BINMEOML_72 | 2497 | 4419 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| BINMEOML_20 | 34160 | 35059 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| BINMEOML_73 | 2495 | 4417 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| BINMEOML_20 | 117 | 1331 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.02 | 99.26 | WP_012102963.1 |
| BINMEOML_20 | 1455 | 2909 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 94.23 | 99.59 | WP_000420313.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BINMEOML_1 | 0.0 | 1.0 | 0.0 |
| BINMEOML_2 | 0.0 | 1.0 | 0.0 |
| BINMEOML_3 | 0.0 | 1.0 | 0.0 |
| BINMEOML_4 | 0.0 | 1.0 | 0.0 |
| BINMEOML_5 | 0.0 | 1.0 | 0.0 |
| BINMEOML_6 | 0.0 | 1.0 | 0.0 |
| BINMEOML_7 | 0.0 | 1.0 | 0.0 |
| BINMEOML_8 | 0.0 | 1.0 | 0.0 |
| BINMEOML_9 | 0.0 | 1.0 | 0.0 |
| BINMEOML_10 | 0.0 | 1.0 | 0.0 |
| BINMEOML_11 | 0.0 | 1.0 | 0.0 |
| BINMEOML_12 | 0.0 | 1.0 | 0.0 |
| BINMEOML_13 | 0.0 | 1.0 | 0.0 |
| BINMEOML_14 | 0.0 | 1.0 | 0.0 |
| BINMEOML_15 | 0.0 | 1.0 | 0.0 |
| BINMEOML_16 | 0.0 | 1.0 | 0.0 |
| BINMEOML_17 | 0.0 | 1.0 | 0.0 |
| BINMEOML_18 | 0.0 | 1.0 | 0.0 |
| BINMEOML_19 | 0.0 | 1.0 | 0.0 |
| BINMEOML_20 | 0.0 | 1.0 | 0.0 |
| BINMEOML_21 | 0.0 | 1.0 | 0.0 |
| BINMEOML_22 | 0.0 | 1.0 | 0.0 |
| BINMEOML_23 | 0.0 | 1.0 | 0.0 |
| BINMEOML_24 | 0.0 | 1.0 | 0.0 |
| BINMEOML_25 | 0.0 | 1.0 | 0.0 |
| BINMEOML_26 | 0.0 | 1.0 | 0.0 |
| BINMEOML_27 | 0.0 | 1.0 | 0.0 |
| BINMEOML_28 | 0.0 | 1.0 | 0.0 |
| BINMEOML_29 | 0.0 | 1.0 | 0.0 |
| BINMEOML_30 | 0.0 | 1.0 | 0.0 |
| BINMEOML_31 | 0.0 | 1.0 | 0.0 |
| BINMEOML_32 | 0.0 | 1.0 | 0.0 |
| BINMEOML_33 | 0.0 | 1.0 | 0.0 |
| BINMEOML_34 | 0.0 | 1.0 | 0.0 |
| BINMEOML_35 | 0.0 | 1.0 | 0.0 |
| BINMEOML_36 | 0.0 | 1.0 | 0.0 |
| BINMEOML_37 | 0.0 | 1.0 | 0.0 |
| BINMEOML_38 | 0.0 | 1.0 | 0.0 |
| BINMEOML_39 | 0.0 | 1.0 | 0.0 |
| BINMEOML_40 | 0.0 | 1.0 | 0.0 |
| BINMEOML_41 | 0.0 | 1.0 | 0.0 |
| BINMEOML_42 | 0.0 | 1.0 | 0.0 |
| BINMEOML_43 | 0.0 | 1.0 | 0.0 |
| BINMEOML_44 | 0.0 | 1.0 | 0.0 |
| BINMEOML_45 | 0.0 | 1.0 | 0.0 |
| BINMEOML_46 | 1.0 | 0.0 | 1.0 |
| BINMEOML_47 | 0.0 | 1.0 | 0.0 |
| BINMEOML_48 | 0.0 | 1.0 | 0.0 |
| BINMEOML_49 | 0.0 | 1.0 | 0.0 |
| BINMEOML_50 | 0.0 | 1.0 | 0.0 |
| BINMEOML_51 | 1.0 | 0.0 | 1.0 |
| BINMEOML_52 | 0.0 | 1.0 | 0.0 |
| BINMEOML_53 | 0.0 | 1.0 | 0.0 |
| BINMEOML_54 | 0.0 | 1.0 | 0.0 |
| BINMEOML_55 | 0.0 | 1.0 | 0.0 |
| BINMEOML_56 | 0.0 | 1.0 | 0.0 |
| BINMEOML_57 | 1.0 | 0.0 | 1.0 |
| BINMEOML_58 | 0.0 | 1.0 | 0.0 |
| BINMEOML_59 | 0.0 | 1.0 | 0.0 |
| BINMEOML_60 | 0.0 | 1.0 | 0.0 |
| BINMEOML_61 | 0.0 | 1.0 | 0.0 |
| BINMEOML_62 | 1.0 | 0.0 | 1.0 |
| BINMEOML_63 | 0.0 | 1.0 | 0.0 |
| BINMEOML_64 | 0.0 | 1.0 | 0.0 |
| BINMEOML_65 | 0.0 | 1.0 | 0.0 |
| BINMEOML_66 | 0.0 | 1.0 | 0.0 |
| BINMEOML_67 | 0.0 | 1.0 | 0.0 |
| BINMEOML_68 | 1.0 | 0.0 | 1.0 |
| BINMEOML_69 | 0.0 | 1.0 | 0.0 |
| BINMEOML_70 | 0.0 | 1.0 | 0.0 |
| BINMEOML_71 | 1.0 | 0.0 | 1.0 |
| BINMEOML_72 | 1.0 | 0.0 | 1.0 |
| BINMEOML_73 | 1.0 | 0.0 | 1.0 |
| BINMEOML_74 | 0.0 | 1.0 | 0.0 |
| BINMEOML_75 | 1.0 | 0.0 | 1.0 |
| BINMEOML_76 | 1.0 | 0.0 | 1.0 |
| BINMEOML_77 | 1.0 | 0.0 | 1.0 |
| BINMEOML_78 | 1.0 | 0.0 | 1.0 |
| BINMEOML_79 | 1.0 | 0.0 | 1.0 |
| BINMEOML_80 | 1.0 | 0.0 | 1.0 |
| BINMEOML_81 | 1.0 | 0.0 | 1.0 |
| BINMEOML_83 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BINMEOML_20 | 65247 | 74565 | False | Siphoviridae | VOG2703, |
Phigaro v2.4.0 (Database: Jan. 2024 release)