Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BIEIJGEO_4 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_6 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_8 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_12 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_13 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_16 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_18 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_19 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_20 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_23 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_24 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_25 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_26 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_27 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_28 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_29 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_30 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_31 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_32 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_33 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_36 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_37 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_38 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_39 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_40 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_41 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_42 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_43 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_44 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_45 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_46 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_47 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_48 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_49 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_52 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_53 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_54 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_55 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_56 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_60 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_61 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_62 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_63 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_64 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_65 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_66 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_67 | 1.0 | 0.0 | 1.0 |
| BIEIJGEO_68 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_69 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_70 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_72 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_73 | 0.0 | 1.0 | 0.0 |
| BIEIJGEO_74 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BIEIJGEO_38 | 3730 | 16809 | False | Unknown | VOG10227, |
| BIEIJGEO_70 | 8179 | 21166 | False | Siphoviridae | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)