Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBCEKGAL_36 | 230160 | 232079 | tet(W) | ARO:3000194 | tet(W) | 100.00 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IBCEKGAL_36 | 230160 | 232079 | tet(W) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | AJ427422 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBCEKGAL_36 | 230163 | 232079 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_002586627.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBCEKGAL_2 | 1.0 | 0.0 | 1.0 |
| IBCEKGAL_7 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_12 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_16 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_22 | 1.0 | 0.0 | 1.0 |
| IBCEKGAL_23 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_24 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_25 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_26 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_27 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_28 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_30 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_31 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_32 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_33 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_34 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_35 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_36 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_37 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_38 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_40 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_41 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_42 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_43 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_44 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_45 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_46 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_47 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_48 | 1.0 | 0.0 | 1.0 |
| IBCEKGAL_49 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_51 | 0.0 | 1.0 | 0.0 |
| IBCEKGAL_52 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IBCEKGAL_31 | 146323 | 153168 | True | Siphoviridae | VOG9667, |
| IBCEKGAL_36 | 137765 | 161444 | False | Unknown | VOG4598, |
Phigaro v2.4.0 (Database: Jan. 2024 release)