Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PEOCLDJO_85 | 63371 | 62667 | WalR | 1.63e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| PEOCLDJO_44 | 58741 | 58544 | CspR | 1.08e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PEOCLDJO_11 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_22 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_33 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_44 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_55 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_58 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_59 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_60 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_61 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_62 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_63 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_64 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_65 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_66 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_67 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_68 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_69 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_70 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_71 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_72 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_73 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_74 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_75 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_76 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_77 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_78 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_79 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_80 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_81 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_82 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_83 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_84 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_85 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_86 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_87 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_88 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_89 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_90 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_91 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_92 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_93 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_95 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_96 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_97 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_98 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_99 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_100 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_101 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_102 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_103 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_105 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_106 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_107 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_109 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_110 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_111 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_112 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_113 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_114 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_115 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_116 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_117 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_118 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_119 | 1.0 | 0.0 | 1.0 |
| PEOCLDJO_129 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_139 | 0.0 | 1.0 | 0.0 |
| PEOCLDJO_150 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PEOCLDJO_22 | 1205 | 13351 | False | Siphoviridae | VOG0198, VOG5562, VOG6795, VOG5998, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321, VOG4967, VOG6450, VOG10867, VOG0181, VOG10059, VOG8520, VOG0862 |
| PEOCLDJO_44 | 4682 | 38259 | False | Siphoviridae | VOG4918, VOG0054, VOG7888, VOG7896, VOG6455, VOG4599, VOG4605, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4549, VOG4570, VOG4892, VOG0198, VOG10869, VOG4693, VOG6623, VOG9860, VOG11003, VOG8987, VOG1638, VOG6238, VOG4566, VOG0186, VOG1309, VOG8241, VOG1305, VOG6495 |
| PEOCLDJO_68 | 1794 | 11920 | False | Siphoviridae | VOG0744, VOG4693, VOG5562, VOG5998, VOG7363, VOG0189, VOG4566, VOG11003, VOG1309, VOG4600, VOG10867, VOG0181, VOG4552, VOG5353, VOG6495, VOG4602 |
| PEOCLDJO_85 | 129306 | 140055 | False | Siphoviridae | VOG1581, VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204 |
| PEOCLDJO_118 | 5783 | 6836 | False | Siphoviridae | VOG4799 |
Phigaro v2.4.0 (Database: Jan. 2024 release)