Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EJNKKENE_56 | 73772 | 73575 | CspR | 2.58e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| EJNKKENE_56 | 73772 | 73575 | CspA | 4.82e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EJNKKENE_1 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_2 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_3 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_4 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_5 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_6 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_7 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_8 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_9 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_10 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_11 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_12 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_13 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_14 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_15 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_16 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_17 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_18 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_19 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_20 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_21 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_22 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_23 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_24 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_25 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_26 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_27 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_28 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_29 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_30 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_31 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_32 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_33 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_34 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_35 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_36 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_37 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_38 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_39 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_40 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_41 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_42 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_43 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_44 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_45 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_46 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_47 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_48 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_49 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_50 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_51 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_52 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_53 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_54 | 1.0 | 0.0 | 1.0 |
| EJNKKENE_55 | 0.0 | 1.0 | 0.0 |
| EJNKKENE_56 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EJNKKENE_22 | 5183 | 29831 | False | Siphoviridae | VOG0052, VOG7438, VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG6154, VOG4581, VOG4571, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502 |
| EJNKKENE_40 | 11863 | 21069 | True | Myoviridae | VOG8730, VOG4357, VOG1026, VOG0384, VOG0382, VOG0083 |
| EJNKKENE_45 | 2305 | 33056 | False | Siphoviridae | VOG8294, VOG0641, VOG0648, VOG4599, VOG0727, VOG4545, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG10904, VOG4564, VOG0720, VOG10227, VOG0796, VOG9920, VOG0198, VOG0536, VOG8685, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321, VOG0650 |
Phigaro v2.4.0 (Database: Jan. 2024 release)