Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AMIMDJPL_129 | 58581 | 59285 | WalR | 5.67e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| AMIMDJPL_103 | 24053 | 24241 | CspR | 4.76e-27 | cold shock protein | 80.95 | 95.45 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AMIMDJPL_17 | 658 | 1587 | rep28 | 930 / 930 | 97.74 | CP003162 |
| AMIMDJPL_23 | 1404 | 2328 | repUS64 | 930 / 954 | 85.48 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AMIMDJPL_10 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_11 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_12 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_13 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_14 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_15 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_16 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_17 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_18 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_19 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_20 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_22 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_23 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_24 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_25 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_26 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_28 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_29 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_30 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_31 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_32 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_33 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_34 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_35 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_36 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_37 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_38 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_39 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_40 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_41 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_42 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_43 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_44 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_45 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_46 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_47 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_48 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_49 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_50 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_51 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_52 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_53 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_54 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_55 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_56 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_57 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_58 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_59 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_60 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_61 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_62 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_63 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_64 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_65 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_66 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_67 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_68 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_69 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_70 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_71 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_72 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_73 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_74 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_75 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_76 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_77 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_78 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_79 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_80 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_81 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_82 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_83 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_84 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_85 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_86 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_87 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_88 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_89 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_90 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_91 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_92 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_93 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_94 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_95 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_96 | 1.0 | 0.0 | 1.0 |
| AMIMDJPL_97 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_98 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_99 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_100 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_101 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_102 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_103 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_104 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_105 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_106 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_107 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_108 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_109 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_110 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_111 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_112 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_113 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_114 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_115 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_116 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_117 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_118 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_119 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_120 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_121 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_122 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_123 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_124 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_125 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_126 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_127 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_128 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_129 | 0.0 | 1.0 | 0.0 |
| AMIMDJPL_130 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AMIMDJPL_72 | 1452 | 19735 | False | Siphoviridae | VOG0804, VOG9640, VOG8438, VOG8224, VOG3462, VOG0801, VOG3636, VOG0725, VOG0799, VOG0724, VOG9583, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720 |
| AMIMDJPL_80 | 5298 | 19791 | False | Siphoviridae | VOG4619, VOG0801, VOG6163, VOG0701, VOG9763, VOG6548, VOG0697, VOG0696, VOG0695, VOG4711, VOG9317, VOG0692 |
| AMIMDJPL_96 | 8117 | 23145 | False | Siphoviridae | VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4553, VOG4573, VOG4556, VOG1886, VOG1886, VOG4581, VOG4841, VOG0198, VOG6005, VOG0189 |
| AMIMDJPL_120 | 4982 | 35483 | False | Siphoviridae | VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG6541, VOG4577, VOG4673, VOG6154, VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG1637, VOG0602, VOG8294 |
Phigaro v2.4.0 (Database: Jan. 2024 release)