Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MJGAKHFP_36 | 1071 | 1268 | CspA | 4.50e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
| MJGAKHFP_36 | 1071 | 1265 | CspR | 1.34e-29 | cold shock protein | 86.15 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MJGAKHFP_1 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_2 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_3 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_4 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_5 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_6 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_7 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_8 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_9 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_10 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_11 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_12 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_13 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_14 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_15 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_16 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_17 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_18 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_19 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_20 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_21 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_22 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_23 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_24 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_25 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_26 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_27 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_28 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_29 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_30 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_31 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_32 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_33 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_34 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_35 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_36 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_37 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_38 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_39 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_40 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_41 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_42 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_43 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_44 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_45 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_46 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_47 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_48 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_49 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_50 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_51 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_52 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_53 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_54 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_55 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_56 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_57 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_58 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_59 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_60 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_62 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_63 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_64 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_65 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_66 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_67 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_69 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_70 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_71 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_72 | 1.0 | 0.0 | 1.0 |
| MJGAKHFP_73 | 0.0 | 1.0 | 0.0 |
| MJGAKHFP_74 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MJGAKHFP_15 | 993 | 26994 | False | Siphoviridae | VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG6698, VOG8263, VOG0801, VOG3462, VOG10972, VOG9997, VOG4856, VOG10223, VOG1637 |
| MJGAKHFP_24 | 6246 | 13120 | False | Myoviridae | VOG0226, VOG0205, VOG0384, VOG0382 |
| MJGAKHFP_25 | 3715 | 17422 | False | Siphoviridae | VOG4693, VOG8685, VOG0189, VOG4566, VOG0514, VOG0226, VOG0283, VOG0535, VOG6135, VOG2228, VOG2228, VOG4552, VOG2228, VOG6450, VOG5353, VOG8520, VOG0862, VOG4821, VOG5494 |
Phigaro v2.4.0 (Database: Jan. 2024 release)