Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MLLPFCBA_1 | 73804 | 74508 | WalR | 2.58e-115 | transcriptional regulatory protein | 83.83 | 100.00 | EPH95667 |
| MLLPFCBA_81 | 5428 | 5622 | CspR | 3.18e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| MLLPFCBA_81 | 5428 | 5625 | CspA | 4.88e-31 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MLLPFCBA_18 | 3078 | 3964 | repUS64 | 889 / 954 | 85.26 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MLLPFCBA_1 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_2 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_3 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_4 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_5 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_6 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_7 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_8 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_9 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_11 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_12 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_13 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_14 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_15 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_16 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_17 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_18 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_19 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_20 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_21 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_22 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_23 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_24 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_25 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_26 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_27 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_28 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_29 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_30 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_31 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_32 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_33 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_34 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_35 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_36 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_37 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_38 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_39 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_40 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_41 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_42 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_43 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_44 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_45 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_46 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_47 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_48 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_49 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_50 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_51 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_52 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_53 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_54 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_55 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_56 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_57 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_58 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_59 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_60 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_61 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_62 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_63 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_64 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_65 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_66 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_67 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_68 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_69 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_70 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_71 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_73 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_74 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_75 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_76 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_77 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_78 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_79 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_80 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_81 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_82 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_83 | 1.0 | 0.0 | 1.0 |
| MLLPFCBA_84 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_85 | 0.0 | 1.0 | 0.0 |
| MLLPFCBA_86 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MLLPFCBA_1 | 63348 | 72793 | False | Siphoviridae | VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG2935, VOG4556, VOG4553, VOG0204 |
| MLLPFCBA_5 | 70127 | 75441 | False | Unknown | VOG8870, VOG10957 |
| MLLPFCBA_17 | 5010 | 35968 | False | Siphoviridae | VOG10059, VOG9667, VOG0685, VOG0283, VOG0226, VOG0514, VOG4799, VOG6005, VOG0044, VOG0198, VOG4841, VOG4581, VOG1886, VOG6939, VOG4556, VOG4568, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG6163, VOG4605, VOG4599, VOG10957, VOG10397 |
| MLLPFCBA_35 | 4985 | 23296 | False | Siphoviridae | VOG3434, VOG1887, VOG4713, VOG1330, VOG1353, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498 |
| MLLPFCBA_62 | 1796 | 10625 | False | Siphoviridae | VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG0044 |
| MLLPFCBA_69 | 39645 | 45312 | False | Siphoviridae | VOG9231, VOG6421, VOG4602, VOG9667, VOG11075, VOG11003, VOG6495, VOG0181, VOG7298 |
Phigaro v2.4.0 (Database: Jan. 2024 release)