Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DIBGFMJI_39 | 11218 | 11922 | WalR | 5.05e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| DIBGFMJI_14 | 92356 | 92553 | CspR | 6.60e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DIBGFMJI_1 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_2 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_3 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_4 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_5 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_6 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_7 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_9 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_10 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_11 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_12 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_13 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_14 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_15 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_16 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_17 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_18 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_19 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_20 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_21 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_22 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_23 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_24 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_25 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_26 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_27 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_28 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_29 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_30 | 1.0 | 0.0 | 1.0 |
| DIBGFMJI_31 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_32 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_33 | 1.0 | 0.0 | 1.0 |
| DIBGFMJI_34 | 1.0 | 0.0 | 1.0 |
| DIBGFMJI_35 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_36 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_37 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_38 | 0.0 | 1.0 | 0.0 |
| DIBGFMJI_39 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DIBGFMJI_14 | 111486 | 118847 | False | Unknown | VOG7236, VOG8241, VOG1309, VOG0186, VOG4566, VOG0226, VOG11003, VOG9860, VOG6623, VOG4693 |
| DIBGFMJI_16 | 1240 | 22489 | False | Siphoviridae | VOG4570, VOG10904, VOG4549, VOG1345, VOG4841, VOG4581, VOG1886, VOG4556, VOG4573, VOG4553, VOG9975, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599 |
| DIBGFMJI_28 | 280 | 22208 | False | Siphoviridae | VOG0198, VOG7136, VOG4570, VOG4549, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599 |
Phigaro v2.4.0 (Database: Jan. 2024 release)