Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CAHMDHJH_58 | 8819 | 8118 | WalR | 1.55e-108 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| CAHMDHJH_63 | 398 | 1327 | rep28 | 930 / 930 | 98.60 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CAHMDHJH_1 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_10 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_17 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_18 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_19 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_20 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_21 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_22 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_23 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_24 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_25 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_26 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_27 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_28 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_29 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_30 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_31 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_32 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_33 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_34 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_35 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_36 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_37 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_38 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_39 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_40 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_41 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_42 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_43 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_44 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_45 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_46 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_47 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_48 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_49 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_50 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_51 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_52 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_53 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_54 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_55 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_56 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_57 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_58 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_59 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_60 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_61 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_62 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_63 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_64 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_65 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_66 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_67 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_68 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_69 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_71 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_73 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_75 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_76 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_77 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_78 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_79 | 1.0 | 0.0 | 1.0 |
| CAHMDHJH_80 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_87 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_89 | 0.0 | 1.0 | 0.0 |
| CAHMDHJH_90 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)