Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LFOPENOD_8 | 21156 | 24716 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.66 | 100.00 | NC_008618.1 |
| LFOPENOD_51 | 15998 | 17917 | tet(W) | ARO:3000194 | tet(W) | 96.87 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LFOPENOD_51 | 15998 | 17910 | tet(W) | Doxycycline, Tetracycline, Minocycline | 98.85 | 99.58 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LFOPENOD_51 | 15998 | 17914 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_004217777.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LFOPENOD_1 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_2 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_3 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_4 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_5 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_6 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_7 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_8 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_9 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_10 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_11 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_12 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_13 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_14 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_15 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_16 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_17 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_18 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_19 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_20 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_21 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_22 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_23 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_24 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_25 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_26 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_27 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_28 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_29 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_30 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_31 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_32 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_33 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_34 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_35 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_36 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_37 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_38 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_39 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_40 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_41 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_42 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_43 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_44 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_45 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_46 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_47 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_48 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_49 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_51 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_52 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_53 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_54 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_55 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_56 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_57 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_58 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_59 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_60 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_61 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_62 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_63 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_64 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_66 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_67 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_68 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_69 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_70 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_71 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_72 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_73 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_74 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_75 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_76 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_77 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_78 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_79 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_80 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_81 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_82 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_83 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_84 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_85 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_86 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_89 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_90 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_91 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_92 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_93 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_94 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_95 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_96 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_97 | 1.0 | 0.0 | 1.0 |
| LFOPENOD_98 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_99 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_100 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_101 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_102 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_103 | 1.0 | 0.0 | 1.0 |
| LFOPENOD_105 | 1.0 | 0.0 | 1.0 |
| LFOPENOD_107 | 0.0 | 1.0 | 0.0 |
| LFOPENOD_109 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)