Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NNCBNCOI_61 | 50178 | 52097 | tet(W) | ARO:3000194 | tet(W) | 96.87 | 100.00 | AJ222769.3 |
| NNCBNCOI_18 | 12562 | 16122 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.66 | 100.00 | NC_008618.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NNCBNCOI_61 | 50178 | 52090 | tet(W) | Doxycycline, Tetracycline, Minocycline | 98.85 | 99.58 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NNCBNCOI_61 | 50178 | 52094 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_004217777.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NNCBNCOI_1 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_2 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_3 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_4 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_5 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_6 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_7 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_8 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_9 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_10 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_11 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_12 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_13 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_14 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_15 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_17 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_18 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_19 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_20 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_21 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_22 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_23 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_24 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_25 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_27 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_28 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_29 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_31 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_32 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_33 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_34 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_35 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_36 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_37 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_38 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_39 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_40 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_41 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_42 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_43 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_44 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_45 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_47 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_48 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_49 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_50 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_51 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_52 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_53 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_54 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_55 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_56 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_57 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_58 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_59 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_60 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_61 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_62 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_63 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_65 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_66 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_67 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_69 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_70 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_71 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_72 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_73 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_74 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_75 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_78 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_79 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_80 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_81 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_82 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_83 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_84 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_85 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_86 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_87 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_88 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_89 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_90 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_91 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_92 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_93 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_94 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_95 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_97 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_99 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_102 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_104 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_105 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_106 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_107 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_109 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_110 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_112 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_113 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_114 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_116 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_117 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_118 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_119 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_121 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_122 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_123 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_124 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_125 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_126 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_128 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_133 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_134 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_136 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_137 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_144 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_145 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_147 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_148 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_149 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_151 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_154 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_156 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_158 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_159 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_162 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_163 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_164 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_168 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_169 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_175 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_177 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_180 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_182 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_185 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_201 | 1.0 | 0.0 | 1.0 |
| NNCBNCOI_213 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_220 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_226 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_229 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_244 | 0.0 | 1.0 | 0.0 |
| NNCBNCOI_256 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)