Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NMPPNCMF_1 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_2 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_3 | 1.0 | 0.0 | 1.0 |
| NMPPNCMF_4 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_5 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_6 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_7 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_8 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_9 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_10 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_11 | 1.0 | 0.0 | 1.0 |
| NMPPNCMF_12 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_13 | 1.0 | 0.0 | 1.0 |
| NMPPNCMF_14 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_15 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_16 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_17 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_18 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_19 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_20 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_21 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_22 | 1.0 | 0.0 | 1.0 |
| NMPPNCMF_23 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_24 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_25 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_26 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_27 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_28 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_29 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_30 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_31 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_32 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_33 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_34 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_35 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_36 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_37 | 0.0 | 1.0 | 0.0 |
| NMPPNCMF_38 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NMPPNCMF_3 | 1793 | 24015 | False | Siphoviridae | VOG5087, VOG0861, VOG0648, VOG5007, VOG4599, VOG0727, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG5413, VOG0198, VOG0327 |
| NMPPNCMF_11 | 7069 | 17957 | False | Siphoviridae | VOG7906, VOG5008, VOG0861, VOG9888, VOG0686, VOG0703, VOG8294, VOG0275, VOG3685, VOG0862, VOG6495 |
| NMPPNCMF_11 | 21354 | 36490 | False | Siphoviridae | VOG0906, VOG4566, VOG0189, VOG5880, VOG4693, VOG0198, VOG10142, VOG0796, VOG10227, VOG0720, VOG4564, VOG10914, VOG4713, VOG0723, VOG5660 |
Phigaro v2.4.0 (Database: Jan. 2024 release)