Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JJPFEKBJ_101 | 13612 | 13418 | CspA | 4.58e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JJPFEKBJ_39 | 1146 | 1985 | repUS67 | 840 / 1039 | 91.19 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JJPFEKBJ_1 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_2 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_3 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_4 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_5 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_6 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_7 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_8 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_9 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_10 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_11 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_12 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_13 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_14 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_15 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_16 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_17 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_18 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_19 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_20 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_21 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_22 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_23 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_24 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_25 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_26 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_27 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_28 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_29 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_30 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_31 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_32 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_33 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_34 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_35 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_36 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_37 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_38 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_39 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_40 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_42 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_44 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_45 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_46 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_47 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_48 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_49 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_50 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_51 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_52 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_53 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_54 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_55 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_56 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_57 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_59 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_60 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_61 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_62 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_63 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_64 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_65 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_66 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_67 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_68 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_69 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_70 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_71 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_72 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_73 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_74 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_75 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_76 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_78 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_79 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_80 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_81 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_82 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_83 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_84 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_85 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_86 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_87 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_88 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_89 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_90 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_91 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_92 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_93 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_95 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_96 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_97 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_100 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_101 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_103 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_104 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_105 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_106 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_107 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_108 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_109 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_110 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_111 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_112 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_113 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_116 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_118 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_119 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_120 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_121 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_122 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_123 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_124 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_125 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_126 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_127 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_128 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_129 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_135 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_146 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_157 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_168 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_179 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_190 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_201 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_212 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_223 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_224 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_235 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_246 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_257 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_268 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_279 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_290 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_301 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_312 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_323 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_334 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_335 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_346 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_357 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_368 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_379 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_390 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_401 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_412 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_423 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_434 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_445 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_446 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_457 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_468 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_479 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_490 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_501 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_512 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_523 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_534 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_545 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_556 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_557 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_568 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_574 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_575 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_576 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_577 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_578 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_579 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_580 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_581 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_582 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_583 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_584 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_585 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_586 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_587 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_588 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_589 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_590 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_591 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_592 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_593 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_594 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_596 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_597 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_598 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_599 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_600 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_601 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_602 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_603 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_604 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_605 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_606 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_607 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_608 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_609 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_610 | 0.0 | 1.0 | 0.0 |
| JJPFEKBJ_611 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_612 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_613 | 1.0 | 0.0 | 1.0 |
| JJPFEKBJ_614 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JJPFEKBJ_46 | 2710 | 23404 | False | Siphoviridae | VOG3462, VOG0801, VOG7316, VOG6163, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0866, VOG8637 |
| JJPFEKBJ_179 | 7156 | 23081 | False | Siphoviridae | VOG6495, VOG1183, VOG7043, VOG3307, VOG0198, VOG0796, VOG10227, VOG0720, VOG0720, VOG4564, VOG7533, VOG4555, VOG1319, VOG4713, VOG0723, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545 |
| JJPFEKBJ_212 | 4435 | 21369 | False | Siphoviridae | VOG10904, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG6163, VOG0801 |
| JJPFEKBJ_223 | 3568 | 11911 | False | Siphoviridae | VOG4602, VOG8520, VOG2124, VOG1564, VOG9469, VOG0707, VOG3478, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799, VOG1183, VOG2388 |
| JJPFEKBJ_223 | 33972 | 64655 | False | Siphoviridae | VOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG0801, VOG3462, VOG5560, VOG8438, VOG4619, VOG3463, VOG4904, VOG4856, VOG1505, VOG4705, VOG3561, VOG1637, VOG0703, VOG4824 |
Phigaro v2.4.0 (Database: Jan. 2024 release)