Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FPNNNKAG_81 | 13609 | 13415 | CspA | 4.58e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FPNNNKAG_1 | 71484 | 72474 | repUS67 | 997 / 1039 | 89.67 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FPNNNKAG_1 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_2 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_13 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_24 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_35 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_46 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_57 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_68 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_79 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_80 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_81 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_82 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_83 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_84 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_85 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_86 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_87 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_88 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_89 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_90 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_91 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_92 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_93 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_94 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_95 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_96 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_97 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_98 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_99 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_100 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_101 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_102 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_103 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_104 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_105 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_106 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_107 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_108 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_109 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_110 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_111 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_112 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_113 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_114 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_115 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_116 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_117 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_118 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_119 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_120 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_121 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_122 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_123 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_124 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_125 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_126 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_127 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_128 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_129 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_130 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_131 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_132 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_133 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_134 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_135 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_136 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_137 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_139 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_140 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_141 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_142 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_143 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_144 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_145 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_146 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_147 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_148 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_149 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_150 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_151 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_152 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_153 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_154 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_155 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_156 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_157 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_158 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_159 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_160 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_161 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_162 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_163 | 0.0 | 1.0 | 0.0 |
| FPNNNKAG_166 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_167 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_168 | 1.0 | 0.0 | 1.0 |
| FPNNNKAG_169 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FPNNNKAG_1 | 45865 | 63391 | False | Unknown | VOG0753, VOG0648, VOG9226, VOG10609, VOG6540, VOG5534, VOG7628, VOG7629, VOG6036, VOG6941, VOG1026, VOG6246, VOG6524 |
| FPNNNKAG_35 | 17337 | 42788 | False | Siphoviridae | VOG0198, VOG8637, VOG0866, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG9471, VOG6163, VOG0801, VOG3462, VOG4687, VOG2621, VOG10593 |
| FPNNNKAG_82 | 75587 | 99909 | False | Siphoviridae | VOG4618, VOG10904, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG6163, VOG0801, VOG3462, VOG3405, VOG8438, VOG1505, VOG4705, VOG8917, VOG0703 |
| FPNNNKAG_137 | 3329 | 11672 | False | Siphoviridae | VOG4602, VOG8520, VOG2124, VOG1564, VOG9469, VOG0707, VOG3478, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799, VOG1183, VOG2388 |
| FPNNNKAG_137 | 33733 | 61248 | False | Siphoviridae | VOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG0801, VOG3462, VOG5560, VOG8438, VOG1505, VOG4705, VOG3561, VOG1637, VOG0703, VOG4824 |
Phigaro v2.4.0 (Database: Jan. 2024 release)