Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HEFKFHKI_152 | 6061 | 5867 | CspA | 3.48e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HEFKFHKI_13 | 29906 | 30895 | repUS67 | 1006 / 1039 | 87.77 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HEFKFHKI_1 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_2 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_3 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_4 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_5 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_6 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_7 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_8 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_9 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_10 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_11 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_12 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_13 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_14 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_15 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_16 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_17 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_18 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_20 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_21 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_22 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_23 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_24 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_25 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_26 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_28 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_29 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_30 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_31 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_32 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_33 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_34 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_35 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_36 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_37 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_39 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_40 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_41 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_42 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_43 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_44 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_45 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_46 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_47 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_48 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_49 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_51 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_52 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_53 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_54 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_55 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_57 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_58 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_59 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_60 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_61 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_62 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_64 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_66 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_68 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_79 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_90 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_101 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_112 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_113 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_124 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_135 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_146 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_148 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_149 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_150 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_151 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_152 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_153 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_154 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_155 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_156 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_157 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_158 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_159 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_160 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_161 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_162 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_163 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_164 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_165 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_166 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_167 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_168 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_169 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_170 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_171 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_172 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_173 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_174 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_175 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_176 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_177 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_178 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_179 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_180 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_181 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_182 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_183 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_184 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_185 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_186 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_187 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_188 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_189 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_190 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_191 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_192 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_193 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_194 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_195 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_196 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_197 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_198 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_199 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_200 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_201 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_202 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_203 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_204 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_205 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_206 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_207 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_208 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_209 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_210 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_211 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_212 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_213 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_214 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_215 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_216 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_217 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_218 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_219 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_220 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_221 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_222 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_223 | 1.0 | 0.0 | 1.0 |
| HEFKFHKI_224 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_225 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_226 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_227 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_228 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_229 | 0.0 | 1.0 | 0.0 |
| HEFKFHKI_230 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HEFKFHKI_90 | 8081 | 15199 | False | Unknown | VOG6941, VOG6246, VOG6524, VOG6031, VOG5721 |
| HEFKFHKI_124 | 1204 | 25487 | False | Siphoviridae | VOG0888, VOG0686, VOG2545, VOG0376, VOG0796, VOG10227, VOG5821, VOG0691, VOG0692, VOG4555, VOG4572, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4545, VOG0801, VOG4619, VOG4612, VOG5601, VOG7946, VOG4334, VOG7896 |
| HEFKFHKI_135 | 13489 | 19953 | False | Unknown | VOG6646, VOG6464, VOG0322, VOG1026, VOG4570, VOG7627 |
| HEFKFHKI_155 | 9487 | 11227 | False | Unknown | VOG0650, VOG4552, VOG10731 |
| HEFKFHKI_164 | 8239 | 17715 | False | Siphoviridae | VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG4581, VOG4841, VOG6542 |
| HEFKFHKI_220 | 3453 | 29187 | True | Siphoviridae | VOG0350, VOG9671, VOG0221, VOG0221, VOG9502, VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG1448, VOG4571, VOG4581, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047, VOG1047, VOG7438 |
Phigaro v2.4.0 (Database: Jan. 2024 release)