Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EIPLGBOP_1131362313429CspA4.58e-29cold shock protein84.6198.48CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
EIPLGBOP_17148472474repUS67997 / 103989.67CP006012

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
EIPLGBOP_11.00.01.0
EIPLGBOP_20.01.00.0
EIPLGBOP_130.01.00.0
EIPLGBOP_240.01.00.0
EIPLGBOP_351.00.01.0
EIPLGBOP_460.01.00.0
EIPLGBOP_570.01.00.0
EIPLGBOP_680.01.00.0
EIPLGBOP_790.01.00.0
EIPLGBOP_900.01.00.0
EIPLGBOP_1010.01.00.0
EIPLGBOP_1120.01.00.0
EIPLGBOP_1130.01.00.0
EIPLGBOP_1240.01.00.0
EIPLGBOP_1350.01.00.0
EIPLGBOP_1460.01.00.0
EIPLGBOP_1570.01.00.0
EIPLGBOP_1680.01.00.0
EIPLGBOP_1790.01.00.0
EIPLGBOP_1900.01.00.0
EIPLGBOP_2010.01.00.0
EIPLGBOP_2120.01.00.0
EIPLGBOP_2230.01.00.0
EIPLGBOP_2240.01.00.0
EIPLGBOP_2350.01.00.0
EIPLGBOP_2410.01.00.0
EIPLGBOP_2421.00.01.0
EIPLGBOP_2430.01.00.0
EIPLGBOP_2440.01.00.0
EIPLGBOP_2450.01.00.0
EIPLGBOP_2460.01.00.0
EIPLGBOP_2470.01.00.0
EIPLGBOP_2480.01.00.0
EIPLGBOP_2490.01.00.0
EIPLGBOP_2500.01.00.0
EIPLGBOP_2510.01.00.0
EIPLGBOP_2520.01.00.0
EIPLGBOP_2530.01.00.0
EIPLGBOP_2541.00.01.0
EIPLGBOP_2550.01.00.0
EIPLGBOP_2560.01.00.0
EIPLGBOP_2570.01.00.0
EIPLGBOP_2580.01.00.0
EIPLGBOP_2590.01.00.0
EIPLGBOP_2600.01.00.0
EIPLGBOP_2610.01.00.0
EIPLGBOP_2620.01.00.0
EIPLGBOP_2630.01.00.0
EIPLGBOP_2640.01.00.0
EIPLGBOP_2650.01.00.0
EIPLGBOP_2660.01.00.0
EIPLGBOP_2670.01.00.0
EIPLGBOP_2680.01.00.0
EIPLGBOP_2690.01.00.0
EIPLGBOP_2700.01.00.0
EIPLGBOP_2710.01.00.0
EIPLGBOP_2720.01.00.0
EIPLGBOP_2730.01.00.0
EIPLGBOP_2740.01.00.0
EIPLGBOP_2750.01.00.0
EIPLGBOP_2760.01.00.0
EIPLGBOP_2770.01.00.0
EIPLGBOP_2781.00.01.0
EIPLGBOP_2791.00.01.0
EIPLGBOP_2810.01.00.0
EIPLGBOP_2820.01.00.0
EIPLGBOP_2830.01.00.0
EIPLGBOP_2840.01.00.0
EIPLGBOP_2851.00.01.0
EIPLGBOP_2860.01.00.0
EIPLGBOP_2870.01.00.0
EIPLGBOP_2880.01.00.0
EIPLGBOP_2890.01.00.0
EIPLGBOP_2901.00.01.0
EIPLGBOP_2910.01.00.0
EIPLGBOP_2920.01.00.0
EIPLGBOP_2930.01.00.0
EIPLGBOP_2941.00.01.0
EIPLGBOP_2951.00.01.0
EIPLGBOP_2960.01.00.0
EIPLGBOP_2971.00.01.0
EIPLGBOP_2980.01.00.0
EIPLGBOP_2990.01.00.0
EIPLGBOP_3001.00.01.0
EIPLGBOP_3010.01.00.0
EIPLGBOP_3021.00.01.0
EIPLGBOP_3030.01.00.0
EIPLGBOP_3040.01.00.0
EIPLGBOP_3050.01.00.0
EIPLGBOP_3061.00.01.0
EIPLGBOP_3071.00.01.0
EIPLGBOP_3080.01.00.0
EIPLGBOP_3101.00.01.0
EIPLGBOP_3121.00.01.0
EIPLGBOP_3131.00.01.0
EIPLGBOP_3141.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
EIPLGBOP_14586563391FalseUnknownVOG0753, VOG0648, VOG9226, VOG10609, VOG6540, VOG5534, VOG7628, VOG7629, VOG6036, VOG6941, VOG1026, VOG6246, VOG6524
EIPLGBOP_351733742788FalseSiphoviridaeVOG0198, VOG8637, VOG0866, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG9471, VOG6163, VOG0801, VOG3462, VOG4687, VOG2621, VOG10593
EIPLGBOP_1127558799909FalseSiphoviridaeVOG4618, VOG10904, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG6163, VOG0801, VOG3462, VOG3405, VOG8438, VOG1505, VOG4705, VOG8917, VOG0703
EIPLGBOP_282332911672FalseSiphoviridaeVOG4602, VOG8520, VOG2124, VOG1564, VOG9469, VOG0707, VOG3478, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799, VOG1183, VOG2388
EIPLGBOP_2823373361248FalseSiphoviridaeVOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG0801, VOG3462, VOG5560, VOG8438, VOG1505, VOG4705, VOG3561, VOG1637, VOG0703, VOG4824

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements