Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ELACENFK_98 | 13592 | 13398 | CspA | 4.57e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ELACENFK_97 | 8758 | 9739 | repUS67 | 987 / 1039 | 89.46 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ELACENFK_1 | 0.0 | 1.0 | 0.0 |
| ELACENFK_2 | 0.0 | 1.0 | 0.0 |
| ELACENFK_3 | 0.0 | 1.0 | 0.0 |
| ELACENFK_4 | 1.0 | 0.0 | 1.0 |
| ELACENFK_5 | 1.0 | 0.0 | 1.0 |
| ELACENFK_7 | 1.0 | 0.0 | 1.0 |
| ELACENFK_8 | 0.0 | 1.0 | 0.0 |
| ELACENFK_9 | 1.0 | 0.0 | 1.0 |
| ELACENFK_10 | 0.0 | 1.0 | 0.0 |
| ELACENFK_11 | 0.0 | 1.0 | 0.0 |
| ELACENFK_12 | 1.0 | 0.0 | 1.0 |
| ELACENFK_13 | 0.0 | 1.0 | 0.0 |
| ELACENFK_15 | 0.0 | 1.0 | 0.0 |
| ELACENFK_16 | 1.0 | 0.0 | 1.0 |
| ELACENFK_17 | 1.0 | 0.0 | 1.0 |
| ELACENFK_18 | 0.0 | 1.0 | 0.0 |
| ELACENFK_19 | 1.0 | 0.0 | 1.0 |
| ELACENFK_20 | 1.0 | 0.0 | 1.0 |
| ELACENFK_21 | 1.0 | 0.0 | 1.0 |
| ELACENFK_23 | 1.0 | 0.0 | 1.0 |
| ELACENFK_24 | 0.0 | 1.0 | 0.0 |
| ELACENFK_25 | 1.0 | 0.0 | 1.0 |
| ELACENFK_26 | 0.0 | 1.0 | 0.0 |
| ELACENFK_27 | 1.0 | 0.0 | 1.0 |
| ELACENFK_30 | 1.0 | 0.0 | 1.0 |
| ELACENFK_35 | 1.0 | 0.0 | 1.0 |
| ELACENFK_46 | 0.0 | 1.0 | 0.0 |
| ELACENFK_57 | 0.0 | 1.0 | 0.0 |
| ELACENFK_68 | 0.0 | 1.0 | 0.0 |
| ELACENFK_79 | 0.0 | 1.0 | 0.0 |
| ELACENFK_90 | 0.0 | 1.0 | 0.0 |
| ELACENFK_93 | 0.0 | 1.0 | 0.0 |
| ELACENFK_94 | 0.0 | 1.0 | 0.0 |
| ELACENFK_95 | 1.0 | 0.0 | 1.0 |
| ELACENFK_96 | 1.0 | 0.0 | 1.0 |
| ELACENFK_97 | 1.0 | 0.0 | 1.0 |
| ELACENFK_98 | 0.0 | 1.0 | 0.0 |
| ELACENFK_99 | 0.0 | 1.0 | 0.0 |
| ELACENFK_100 | 1.0 | 0.0 | 1.0 |
| ELACENFK_101 | 0.0 | 1.0 | 0.0 |
| ELACENFK_102 | 1.0 | 0.0 | 1.0 |
| ELACENFK_103 | 0.0 | 1.0 | 0.0 |
| ELACENFK_104 | 0.0 | 1.0 | 0.0 |
| ELACENFK_105 | 0.0 | 1.0 | 0.0 |
| ELACENFK_106 | 1.0 | 0.0 | 1.0 |
| ELACENFK_107 | 0.0 | 1.0 | 0.0 |
| ELACENFK_108 | 0.0 | 1.0 | 0.0 |
| ELACENFK_109 | 0.0 | 1.0 | 0.0 |
| ELACENFK_110 | 1.0 | 0.0 | 1.0 |
| ELACENFK_111 | 1.0 | 0.0 | 1.0 |
| ELACENFK_112 | 0.0 | 1.0 | 0.0 |
| ELACENFK_113 | 0.0 | 1.0 | 0.0 |
| ELACENFK_114 | 0.0 | 1.0 | 0.0 |
| ELACENFK_115 | 0.0 | 1.0 | 0.0 |
| ELACENFK_116 | 0.0 | 1.0 | 0.0 |
| ELACENFK_117 | 0.0 | 1.0 | 0.0 |
| ELACENFK_118 | 0.0 | 1.0 | 0.0 |
| ELACENFK_119 | 1.0 | 0.0 | 1.0 |
| ELACENFK_120 | 0.0 | 1.0 | 0.0 |
| ELACENFK_121 | 1.0 | 0.0 | 1.0 |
| ELACENFK_122 | 0.0 | 1.0 | 0.0 |
| ELACENFK_123 | 0.0 | 1.0 | 0.0 |
| ELACENFK_124 | 0.0 | 1.0 | 0.0 |
| ELACENFK_125 | 0.0 | 1.0 | 0.0 |
| ELACENFK_126 | 0.0 | 1.0 | 0.0 |
| ELACENFK_127 | 0.0 | 1.0 | 0.0 |
| ELACENFK_128 | 0.0 | 1.0 | 0.0 |
| ELACENFK_129 | 0.0 | 1.0 | 0.0 |
| ELACENFK_130 | 0.0 | 1.0 | 0.0 |
| ELACENFK_131 | 1.0 | 0.0 | 1.0 |
| ELACENFK_132 | 0.0 | 1.0 | 0.0 |
| ELACENFK_133 | 0.0 | 1.0 | 0.0 |
| ELACENFK_134 | 0.0 | 1.0 | 0.0 |
| ELACENFK_135 | 0.0 | 1.0 | 0.0 |
| ELACENFK_136 | 0.0 | 1.0 | 0.0 |
| ELACENFK_137 | 0.0 | 1.0 | 0.0 |
| ELACENFK_138 | 0.0 | 1.0 | 0.0 |
| ELACENFK_139 | 0.0 | 1.0 | 0.0 |
| ELACENFK_140 | 0.0 | 1.0 | 0.0 |
| ELACENFK_141 | 0.0 | 1.0 | 0.0 |
| ELACENFK_142 | 0.0 | 1.0 | 0.0 |
| ELACENFK_143 | 0.0 | 1.0 | 0.0 |
| ELACENFK_144 | 0.0 | 1.0 | 0.0 |
| ELACENFK_145 | 0.0 | 1.0 | 0.0 |
| ELACENFK_146 | 0.0 | 1.0 | 0.0 |
| ELACENFK_147 | 0.0 | 1.0 | 0.0 |
| ELACENFK_148 | 0.0 | 1.0 | 0.0 |
| ELACENFK_149 | 0.0 | 1.0 | 0.0 |
| ELACENFK_150 | 0.0 | 1.0 | 0.0 |
| ELACENFK_151 | 0.0 | 1.0 | 0.0 |
| ELACENFK_152 | 0.0 | 1.0 | 0.0 |
| ELACENFK_153 | 0.0 | 1.0 | 0.0 |
| ELACENFK_154 | 0.0 | 1.0 | 0.0 |
| ELACENFK_155 | 0.0 | 1.0 | 0.0 |
| ELACENFK_156 | 1.0 | 0.0 | 1.0 |
| ELACENFK_157 | 1.0 | 0.0 | 1.0 |
| ELACENFK_158 | 0.0 | 1.0 | 0.0 |
| ELACENFK_159 | 0.0 | 1.0 | 0.0 |
| ELACENFK_160 | 0.0 | 1.0 | 0.0 |
| ELACENFK_161 | 0.0 | 1.0 | 0.0 |
| ELACENFK_162 | 1.0 | 0.0 | 1.0 |
| ELACENFK_163 | 1.0 | 0.0 | 1.0 |
| ELACENFK_164 | 1.0 | 0.0 | 1.0 |
| ELACENFK_165 | 0.0 | 1.0 | 0.0 |
| ELACENFK_166 | 1.0 | 0.0 | 1.0 |
| ELACENFK_167 | 0.0 | 1.0 | 0.0 |
| ELACENFK_168 | 0.0 | 1.0 | 0.0 |
| ELACENFK_169 | 1.0 | 0.0 | 1.0 |
| ELACENFK_170 | 0.0 | 1.0 | 0.0 |
| ELACENFK_171 | 0.0 | 1.0 | 0.0 |
| ELACENFK_172 | 0.0 | 1.0 | 0.0 |
| ELACENFK_173 | 0.0 | 1.0 | 0.0 |
| ELACENFK_174 | 0.0 | 1.0 | 0.0 |
| ELACENFK_175 | 1.0 | 0.0 | 1.0 |
| ELACENFK_176 | 1.0 | 0.0 | 1.0 |
| ELACENFK_177 | 0.0 | 1.0 | 0.0 |
| ELACENFK_178 | 0.0 | 1.0 | 0.0 |
| ELACENFK_179 | 0.0 | 1.0 | 0.0 |
| ELACENFK_180 | 1.0 | 0.0 | 1.0 |
| ELACENFK_181 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ELACENFK_35 | 2598 | 28049 | False | Siphoviridae | VOG4334, VOG10593, VOG2621, VOG4687, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0866, VOG8637 |
| ELACENFK_94 | 3307 | 10844 | False | Siphoviridae | VOG4602, VOG8520, VOG2124, VOG1564, VOG9469, VOG0707, VOG3478, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799 |
| ELACENFK_94 | 33711 | 61226 | False | Siphoviridae | VOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG0801, VOG3462, VOG5560, VOG8438, VOG1505, VOG4705, VOG3561, VOG1637, VOG0703, VOG4824 |
| ELACENFK_95 | 4359 | 32546 | False | Siphoviridae | VOG7368, VOG4705, VOG4334, VOG4856, VOG9997, VOG9091, VOG10972, VOG3462, VOG0801, VOG0817, VOG0725, VOG0724, VOG4713, VOG1329, VOG10914, VOG4564, VOG0720, VOG4544, VOG0611, VOG4571, VOG4618 |
| ELACENFK_96 | 17003 | 22369 | False | Unknown | VOG6031, VOG6524, VOG6246, VOG6941, VOG6036 |
| ELACENFK_97 | 12667 | 22702 | False | Unknown | VOG5722, VOG4544, VOG5721, VOG6031, VOG6524, VOG6246, VOG6941, VOG6036, VOG7629 |
| ELACENFK_171 | 4355 | 27771 | False | Siphoviridae | VOG10904, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG6163, VOG0801, VOG3462, VOG3405, VOG8438, VOG1505, VOG4705, VOG8917, VOG0703 |
Phigaro v2.4.0 (Database: Jan. 2024 release)