Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OMPBEJCL_571803718231CspA5.96e-29cold shock protein84.6198.48CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
OMPBEJCL_131588816869repUS67987 / 103989.46CP006012

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
OMPBEJCL_10.01.00.0
OMPBEJCL_21.00.01.0
OMPBEJCL_31.00.01.0
OMPBEJCL_41.00.01.0
OMPBEJCL_50.01.00.0
OMPBEJCL_60.01.00.0
OMPBEJCL_81.00.01.0
OMPBEJCL_90.01.00.0
OMPBEJCL_100.01.00.0
OMPBEJCL_111.00.01.0
OMPBEJCL_131.00.01.0
OMPBEJCL_141.00.01.0
OMPBEJCL_151.00.01.0
OMPBEJCL_160.01.00.0
OMPBEJCL_181.00.01.0
OMPBEJCL_190.01.00.0
OMPBEJCL_201.00.01.0
OMPBEJCL_211.00.01.0
OMPBEJCL_220.01.00.0
OMPBEJCL_230.01.00.0
OMPBEJCL_240.01.00.0
OMPBEJCL_251.00.01.0
OMPBEJCL_261.00.01.0
OMPBEJCL_271.00.01.0
OMPBEJCL_281.00.01.0
OMPBEJCL_311.00.01.0
OMPBEJCL_321.00.01.0
OMPBEJCL_341.00.01.0
OMPBEJCL_350.01.00.0
OMPBEJCL_360.01.00.0
OMPBEJCL_381.00.01.0
OMPBEJCL_391.00.01.0
OMPBEJCL_460.01.00.0
OMPBEJCL_570.01.00.0
OMPBEJCL_680.01.00.0
OMPBEJCL_790.01.00.0
OMPBEJCL_900.01.00.0
OMPBEJCL_1010.01.00.0
OMPBEJCL_1120.01.00.0
OMPBEJCL_1130.01.00.0
OMPBEJCL_1191.00.01.0
OMPBEJCL_1200.01.00.0
OMPBEJCL_1210.01.00.0
OMPBEJCL_1221.00.01.0
OMPBEJCL_1230.01.00.0
OMPBEJCL_1240.01.00.0
OMPBEJCL_1250.01.00.0
OMPBEJCL_1260.01.00.0
OMPBEJCL_1271.00.01.0
OMPBEJCL_1280.01.00.0
OMPBEJCL_1290.01.00.0
OMPBEJCL_1301.00.01.0
OMPBEJCL_1310.01.00.0
OMPBEJCL_1320.01.00.0
OMPBEJCL_1330.01.00.0
OMPBEJCL_1340.01.00.0
OMPBEJCL_1350.01.00.0
OMPBEJCL_1360.01.00.0
OMPBEJCL_1370.01.00.0
OMPBEJCL_1381.00.01.0
OMPBEJCL_1390.01.00.0
OMPBEJCL_1400.01.00.0
OMPBEJCL_1410.01.00.0
OMPBEJCL_1420.01.00.0
OMPBEJCL_1430.01.00.0
OMPBEJCL_1440.01.00.0
OMPBEJCL_1450.01.00.0
OMPBEJCL_1460.01.00.0
OMPBEJCL_1470.01.00.0
OMPBEJCL_1480.01.00.0
OMPBEJCL_1491.00.01.0
OMPBEJCL_1500.01.00.0
OMPBEJCL_1510.01.00.0
OMPBEJCL_1520.01.00.0
OMPBEJCL_1530.01.00.0
OMPBEJCL_1540.01.00.0
OMPBEJCL_1550.01.00.0
OMPBEJCL_1560.01.00.0
OMPBEJCL_1570.01.00.0
OMPBEJCL_1580.01.00.0
OMPBEJCL_1590.01.00.0
OMPBEJCL_1600.01.00.0
OMPBEJCL_1610.01.00.0
OMPBEJCL_1620.01.00.0
OMPBEJCL_1630.01.00.0
OMPBEJCL_1640.01.00.0
OMPBEJCL_1650.01.00.0
OMPBEJCL_1660.01.00.0
OMPBEJCL_1670.01.00.0
OMPBEJCL_1680.01.00.0
OMPBEJCL_1690.01.00.0
OMPBEJCL_1700.01.00.0
OMPBEJCL_1710.01.00.0
OMPBEJCL_1720.01.00.0
OMPBEJCL_1730.01.00.0
OMPBEJCL_1740.01.00.0
OMPBEJCL_1750.01.00.0
OMPBEJCL_1761.00.01.0
OMPBEJCL_1770.01.00.0
OMPBEJCL_1781.00.01.0
OMPBEJCL_1790.01.00.0
OMPBEJCL_1801.00.01.0
OMPBEJCL_1811.00.01.0
OMPBEJCL_1820.01.00.0
OMPBEJCL_1830.01.00.0
OMPBEJCL_1841.00.01.0
OMPBEJCL_1850.01.00.0
OMPBEJCL_1860.01.00.0
OMPBEJCL_1871.00.01.0
OMPBEJCL_1881.00.01.0
OMPBEJCL_1891.00.01.0
OMPBEJCL_1900.01.00.0
OMPBEJCL_1910.01.00.0
OMPBEJCL_1920.01.00.0
OMPBEJCL_1931.00.01.0
OMPBEJCL_1940.01.00.0
OMPBEJCL_1951.00.01.0
OMPBEJCL_1961.00.01.0
OMPBEJCL_1970.01.00.0
OMPBEJCL_1980.01.00.0
OMPBEJCL_1991.00.01.0
OMPBEJCL_2000.01.00.0
OMPBEJCL_2011.00.01.0
OMPBEJCL_2020.01.00.0
OMPBEJCL_2030.01.00.0
OMPBEJCL_2041.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
OMPBEJCL_1354611083FalseSiphoviridaeVOG4602, VOG8520, VOG2124, VOG1564, VOG9469, VOG0707, VOG3478, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799
OMPBEJCL_13395061462FalseSiphoviridaeVOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4545, VOG0801, VOG3462, VOG5560, VOG8438, VOG1505, VOG4705, VOG3561, VOG1637, VOG0703, VOG4824
OMPBEJCL_13503112960FalseUnknownVOG6941, VOG6246, VOG6524, VOG6031, VOG5721, VOG4544
OMPBEJCL_241591847107FalseSiphoviridaeVOG9667, VOG0275, VOG7188, VOG0918, VOG4615, VOG0703, VOG8917, VOG2021, VOG4705, VOG1505, VOG4856, VOG4904, VOG3463, VOG4619, VOG0801, VOG4545, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG5821, VOG4544
OMPBEJCL_1128353790916FalseUnknownVOG0275, VOG3361, VOG0862, VOG8520, VOG8520, VOG1564, VOG9469, VOG4552, VOG8426, VOG2228
OMPBEJCL_119299928430FalseSiphoviridaeVOG10593, VOG2621, VOG4687, VOG4910, VOG4633, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG4555, VOG7533, VOG4564, VOG0720, VOG10227, VOG0796, VOG0198, VOG3307, VOG6995, VOG7043, VOG1183, VOG6495, VOG0327, VOG4609
OMPBEJCL_12791723674FalseSiphoviridaeVOG0648, VOG9888, VOG10608, VOG1335, VOG6163, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG7038, VOG0720, VOG4544

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements