Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IEDDHAAC_57 | 18037 | 18231 | CspA | 5.96e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IEDDHAAC_1 | 46584 | 47573 | repUS67 | 1006 / 1039 | 87.77 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IEDDHAAC_1 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_2 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_3 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_4 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_5 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_6 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_7 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_8 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_9 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_12 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_13 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_14 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_15 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_18 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_19 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_24 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_35 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_46 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_57 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_68 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_79 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_82 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_83 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_84 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_85 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_86 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_87 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_88 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_89 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_90 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_91 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_92 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_93 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_94 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_95 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_96 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_97 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_98 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_99 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_100 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_101 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_102 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_103 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_104 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_105 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_106 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_107 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_108 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_109 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_110 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_111 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_112 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_113 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_114 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_115 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_116 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_117 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_118 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_119 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_120 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_121 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_122 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_123 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_124 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_125 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_126 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_127 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_128 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_129 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_130 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_131 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_132 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_133 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_134 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_135 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_136 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_137 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_138 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_139 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_140 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_141 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_142 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_143 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_144 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_145 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_146 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_147 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_148 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_149 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_150 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_151 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_152 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_153 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_154 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_155 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_156 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_157 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_158 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_159 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_160 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_161 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_162 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_163 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_164 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_165 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_166 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_167 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_168 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_169 | 0.0 | 1.0 | 0.0 |
| IEDDHAAC_170 | 1.0 | 0.0 | 1.0 |
| IEDDHAAC_171 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IEDDHAAC_1 | 22952 | 40892 | False | Unknown | VOG0054, VOG0753, VOG0648, VOG9226, VOG10609, VOG6540, VOG5534, VOG7628, VOG7629, VOG6036, VOG6941, VOG6246, VOG6524, VOG6031 |
| IEDDHAAC_1 | 75499 | 95600 | False | Siphoviridae | VOG1026, VOG4570, VOG7627, VOG0025, VOG0377, VOG1026, VOG2451, VOG4593, VOG1344, VOG4549, VOG9060, VOG5821, VOG0787, VOG1638 |
| IEDDHAAC_13 | 15918 | 47107 | False | Siphoviridae | VOG9667, VOG0275, VOG7188, VOG0918, VOG4615, VOG0703, VOG8917, VOG2021, VOG4705, VOG1505, VOG4856, VOG4904, VOG3463, VOG4619, VOG0801, VOG4545, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG5821, VOG4544 |
| IEDDHAAC_84 | 3546 | 11083 | False | Siphoviridae | VOG4602, VOG8520, VOG2124, VOG1564, VOG9469, VOG0707, VOG3478, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799 |
| IEDDHAAC_84 | 33950 | 61462 | False | Siphoviridae | VOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4545, VOG0801, VOG3462, VOG5560, VOG8438, VOG1505, VOG4705, VOG3561, VOG1637, VOG0703, VOG4824 |
| IEDDHAAC_85 | 2999 | 28430 | False | Siphoviridae | VOG10593, VOG2621, VOG4687, VOG4910, VOG4633, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG4555, VOG7533, VOG4564, VOG0720, VOG10227, VOG0796, VOG0198, VOG3307, VOG6995, VOG7043, VOG1183, VOG6495, VOG0327, VOG4609 |
| IEDDHAAC_92 | 917 | 23674 | False | Siphoviridae | VOG0648, VOG9888, VOG10608, VOG1335, VOG6163, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG7038, VOG0720, VOG4544 |
| IEDDHAAC_106 | 83537 | 90916 | False | Unknown | VOG0275, VOG3361, VOG0862, VOG8520, VOG8520, VOG1564, VOG9469, VOG4552, VOG8426, VOG2228 |
Phigaro v2.4.0 (Database: Jan. 2024 release)