Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AEOKOHKH_2 | 83250 | 83954 | WalR | 7.04e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| AEOKOHKH_45 | 7030 | 7224 | CspR | 9.24e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| AEOKOHKH_45 | 7030 | 7227 | CspA | 1.42e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AEOKOHKH_74 | 6841 | 7715 | rep28 | 875 / 930 | 99.77 | CP003162 |
| AEOKOHKH_109 | 1 | 859 | repUS64 | 866 / 954 | 85.10 | JN601038 |
| AEOKOHKH_80 | 1856 | 2890 | rep38 | 1045 / 1104 | 83.54 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AEOKOHKH_1 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_2 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_3 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_4 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_5 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_6 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_7 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_8 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_9 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_10 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_11 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_12 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_13 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_14 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_15 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_16 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_17 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_18 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_19 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_20 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_21 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_22 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_23 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_24 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_25 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_26 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_27 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_28 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_29 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_30 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_31 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_32 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_33 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_34 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_35 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_36 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_37 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_38 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_39 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_40 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_41 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_42 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_43 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_44 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_45 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_46 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_47 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_48 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_49 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_50 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_51 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_52 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_53 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_54 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_55 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_56 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_57 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_58 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_59 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_60 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_61 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_62 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_63 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_64 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_65 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_66 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_67 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_68 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_69 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_70 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_71 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_72 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_73 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_74 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_75 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_76 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_77 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_78 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_79 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_80 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_81 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_82 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_83 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_84 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_85 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_86 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_87 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_88 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_89 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_90 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_91 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_93 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_94 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_95 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_96 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_97 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_98 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_99 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_100 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_101 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_102 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_103 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_104 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_105 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_107 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_108 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_109 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_110 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_111 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_112 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_113 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_114 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_115 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_116 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_117 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_118 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_119 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_120 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_121 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_122 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_123 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_124 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_125 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_126 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_127 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_128 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_129 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_130 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_131 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_132 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_133 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_134 | 0.0 | 1.0 | 0.0 |
| AEOKOHKH_135 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_136 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_137 | 1.0 | 0.0 | 1.0 |
| AEOKOHKH_138 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AEOKOHKH_35 | 4978 | 31551 | False | Siphoviridae | VOG0283, VOG0226, VOG4566, VOG4552, VOG4693, VOG10015, VOG0044, VOG0198, VOG5709, VOG0045, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG9583, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG4619, VOG4856, VOG9640, VOG0804, VOG7896 |
| AEOKOHKH_37 | 1834 | 25618 | False | Siphoviridae | VOG10957, VOG4599, VOG4605, VOG5904, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG3643 |
Phigaro v2.4.0 (Database: Jan. 2024 release)