Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KCMDJGBA_227 | 50485 | 50288 | CspA | 1.32e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| KCMDJGBA_227 | 50485 | 50291 | CspR | 5.72e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KCMDJGBA_1 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_2 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_3 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_4 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_5 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_10 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_11 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_13 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_15 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_24 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_26 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_29 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_30 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_35 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_39 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_41 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_46 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_47 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_52 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_53 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_55 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_57 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_58 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_62 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_68 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_79 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_83 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_91 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_105 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_112 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_120 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_128 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_132 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_134 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_145 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_146 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_156 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_167 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_170 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_171 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_172 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_173 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_174 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_175 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_176 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_177 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_178 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_180 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_182 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_183 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_184 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_185 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_186 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_187 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_188 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_189 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_190 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_191 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_192 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_193 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_194 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_195 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_196 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_197 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_198 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_199 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_200 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_201 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_202 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_203 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_204 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_205 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_206 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_207 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_208 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_209 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_210 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_211 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_212 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_213 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_214 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_215 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_216 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_217 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_218 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_219 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_223 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_224 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_226 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_227 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_228 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_229 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_230 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_231 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_232 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_233 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_235 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_236 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_237 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_238 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_239 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_240 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_241 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_242 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_243 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_244 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_245 | 1.0 | 0.0 | 1.0 |
| KCMDJGBA_247 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_248 | 0.0 | 1.0 | 0.0 |
| KCMDJGBA_249 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KCMDJGBA_203 | 19434 | 63898 | False | Siphoviridae | VOG9091, VOG8917, VOG10223, VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG8263, VOG6698, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG8482, VOG1869, VOG3349, VOG0198, VOG1446, VOG0198, VOG8625, VOG0044, VOG4559, VOG4361, VOG0536, VOG4237, VOG0638, VOG10198, VOG4693, VOG7761, VOG8685, VOG0189, VOG8647, VOG0514, VOG0226, VOG0186, VOG1309, VOG2228 |
| KCMDJGBA_226 | 13788 | 39320 | True | Siphoviridae | VOG7438, VOG1047, VOG0021, VOG0026, VOG4552, VOG4606, VOG0327, VOG4548, VOG0198, VOG8909, VOG4581, VOG4571, VOG7439, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG4589, VOG0641, VOG9502, VOG2576, VOG0221, VOG0221, VOG0221 |
Phigaro v2.4.0 (Database: Jan. 2024 release)