Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JGAHDJOP_42 | 434 | 1322 | rep38 | 898 / 903 | 82.18 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JGAHDJOP_1 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_2 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_3 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_4 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_5 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_6 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_7 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_8 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_9 | 1.0 | 0.0 | 1.0 |
| JGAHDJOP_10 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_11 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_12 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_13 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_14 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_15 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_16 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_17 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_18 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_19 | 1.0 | 0.0 | 1.0 |
| JGAHDJOP_20 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_21 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_22 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_23 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_24 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_25 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_26 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_27 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_28 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_29 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_31 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_32 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_33 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_34 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_35 | 1.0 | 0.0 | 1.0 |
| JGAHDJOP_36 | 1.0 | 0.0 | 1.0 |
| JGAHDJOP_37 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_38 | 1.0 | 0.0 | 1.0 |
| JGAHDJOP_39 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_40 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_41 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_42 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_43 | 0.0 | 1.0 | 0.0 |
| JGAHDJOP_44 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JGAHDJOP_5 | 31430 | 38512 | False | Unknown | VOG0322, VOG5106, VOG0189 |
| JGAHDJOP_11 | 102604 | 144048 | False | Myoviridae | VOG0413, VOG9474, VOG9998, VOG4824, VOG0703, VOG3424, VOG0861, VOG4705, VOG9945, VOG10972, VOG4862, VOG4691, VOG9719, VOG3894, VOG4885, VOG4865, VOG5793, VOG3892, VOG3891, VOG3890, VOG5612, VOG4870, VOG1900, VOG3888, VOG4623, VOG4572, VOG4555, VOG4564, VOG0720, VOG5681, VOG0796, VOG0198, VOG6951, VOG0600, VOG6952, VOG0327, VOG4606, VOG6545, VOG4548, VOG0322, VOG9708, VOG8241, VOG0010, VOG9667, VOG0862 |
| JGAHDJOP_40 | 82117 | 86190 | False | Myoviridae | VOG4927, VOG4410, VOG6396 |
Phigaro v2.4.0 (Database: Jan. 2024 release)