Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GFLLANIM_1 | 53456 | 54157 | WalR | 9.33e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| GFLLANIM_2 | 3369 | 4304 | rep28 | 936 / 936 | 99.25 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GFLLANIM_1 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_2 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_3 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_4 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_5 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_6 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_7 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_8 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_9 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_10 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_11 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_13 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_15 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_16 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_18 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_19 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_20 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_21 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_22 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_23 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_24 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_25 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_26 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_29 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_30 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_31 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_32 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_33 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_34 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_35 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_43 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_47 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_49 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_50 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_51 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_52 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_53 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_54 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_55 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_56 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_57 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_58 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_59 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_60 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_61 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_62 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_63 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_64 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_65 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_66 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_67 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_68 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_69 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_71 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_72 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_74 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_75 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_76 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_77 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_78 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_79 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_80 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_81 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_82 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_83 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_84 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_85 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_86 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_87 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_88 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_90 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_91 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_92 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_93 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_94 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_95 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_96 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_97 | 0.0 | 1.0 | 0.0 |
| GFLLANIM_99 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_100 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_101 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_102 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_103 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_104 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_105 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_106 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_107 | 1.0 | 0.0 | 1.0 |
| GFLLANIM_108 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GFLLANIM_20 | 7071 | 39851 | False | Myoviridae | VOG6495, VOG0283, VOG0226, VOG0514, VOG4799, VOG0189, VOG0052, VOG0195, VOG0044, VOG3643, VOG4010, VOG0149, VOG0198, VOG0045, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG1353, VOG1883, VOG1352, VOG4699, VOG6163, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845 |
| GFLLANIM_69 | 25731 | 70070 | False | Myoviridae | VOG0703, VOG5924, VOG8917, VOG3298, VOG3298, VOG7230, VOG6540, VOG4845, VOG4691, VOG0573, VOG1348, VOG1433, VOG1956, VOG4910, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4710, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0275, VOG0796, VOG5446, VOG0198, VOG4010, VOG0536, VOG5545, VOG9507, VOG0822, VOG7484, VOG6005, VOG0514, VOG0025, VOG4799, VOG0226, VOG0322, VOG0685, VOG11003, VOG0650, VOG4552, VOG8520 |
| GFLLANIM_78 | 6457 | 41537 | False | Myoviridae | VOG3298, VOG3298, VOG0565, VOG4894, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG5068, VOG6131, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG2779, VOG1915, VOG4865, VOG4564, VOG1912, VOG10227, VOG0796, VOG0198, VOG4010, VOG0044, VOG6005, VOG4693, VOG7236, VOG0186 |
Phigaro v2.4.0 (Database: Jan. 2024 release)