Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AJJJDFNN_177 | 83264 | 83968 | WalR | 5.35e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| AJJJDFNN_160 | 6880 | 7074 | CspR | 3.13e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| AJJJDFNN_160 | 6880 | 7077 | CspA | 4.81e-31 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AJJJDFNN_187 | 1640 | 2575 | rep28 | 936 / 936 | 100.00 | CP005948 |
| AJJJDFNN_183 | 311 | 1186 | rep38 | 876 / 903 | 99.32 | CP005943 |
| AJJJDFNN_178 | 512 | 1468 | repUS64 | 958 / 954 | 92.17 | JN601038 |
| AJJJDFNN_161 | 1187 | 2149 | repUS73 | 978 / 1101 | 80.06 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AJJJDFNN_1 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_2 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_3 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_4 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_5 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_6 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_7 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_8 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_9 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_10 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_11 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_12 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_13 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_14 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_15 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_16 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_17 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_18 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_19 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_20 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_21 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_22 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_23 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_24 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_25 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_26 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_27 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_28 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_29 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_31 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_32 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_33 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_44 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_55 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_66 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_77 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_88 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_98 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_99 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_100 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_101 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_102 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_103 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_104 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_105 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_106 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_107 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_108 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_109 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_110 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_111 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_112 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_113 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_114 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_115 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_116 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_117 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_118 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_119 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_120 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_121 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_122 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_123 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_124 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_125 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_126 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_127 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_128 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_129 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_130 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_131 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_132 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_133 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_134 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_135 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_136 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_137 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_138 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_139 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_140 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_141 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_142 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_143 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_144 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_145 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_146 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_147 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_148 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_149 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_150 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_151 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_152 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_153 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_154 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_155 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_156 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_157 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_158 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_159 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_160 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_161 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_162 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_163 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_164 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_165 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_166 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_167 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_168 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_169 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_170 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_171 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_172 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_173 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_174 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_175 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_176 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_177 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_178 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_179 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_180 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_181 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_182 | 0.0 | 1.0 | 0.0 |
| AJJJDFNN_183 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_184 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_185 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_187 | 1.0 | 0.0 | 1.0 |
| AJJJDFNN_188 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AJJJDFNN_22 | 50724 | 77302 | False | Siphoviridae | VOG0753, VOG8294, VOG4705, VOG4660, VOG1414, VOG4619, VOG0801, VOG6163, VOG0701, VOG9763, VOG6548, VOG0697, VOG0696, VOG0695, VOG4711, VOG9317, VOG0692, VOG0691, VOG0611, VOG0996, VOG0198, VOG0044 |
| AJJJDFNN_114 | 5153 | 16508 | False | Siphoviridae | VOG0275, VOG0198, VOG0204, VOG4553, VOG4556, VOG4544, VOG4581, VOG4841 |
Phigaro v2.4.0 (Database: Jan. 2024 release)