Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OKPHNMAL_6 | 2116 | 2820 | WalR | 2.68e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| OKPHNMAL_33 | 113217 | 113029 | CspR | 2.11e-29 | cold shock protein | 85.71 | 95.45 | AAO82613 |
| OKPHNMAL_33 | 113217 | 113029 | CspA | 1.39e-28 | cold shock protein | 85.71 | 95.45 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OKPHNMAL_29 | 20078 | 21220 | repUS73 | 1143 / 1101 | 92.04 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OKPHNMAL_1 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_2 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_3 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_4 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_5 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_6 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_7 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_8 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_9 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_10 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_11 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_12 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_13 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_14 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_15 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_16 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_17 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_18 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_19 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_20 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_21 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_22 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_23 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_24 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_25 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_26 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_27 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_28 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_29 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_30 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_31 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_32 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_33 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_34 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_35 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_36 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_37 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_38 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_39 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_40 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_41 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_42 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_43 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_44 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_45 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_46 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_47 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_48 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_49 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_50 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_51 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_52 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_53 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_54 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_55 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_56 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_57 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_58 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_59 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_60 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_61 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_62 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_63 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_64 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_65 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_66 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_67 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_68 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_69 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_70 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_71 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_72 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_73 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_74 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_75 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_76 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_77 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_79 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_80 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_81 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_82 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_83 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_84 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_85 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_86 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_87 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_88 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_89 | 1.0 | 0.0 | 1.0 |
| OKPHNMAL_90 | 0.0 | 1.0 | 0.0 |
| OKPHNMAL_97 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OKPHNMAL_11 | 698408 | 725636 | False | Siphoviridae | VOG1191, VOG0054, VOG0753, VOG9998, VOG0254, VOG8870, VOG10957, VOG4599, VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4568, VOG4556, VOG6939, VOG1886, VOG4581, VOG4841, VOG5525 |
| OKPHNMAL_13 | 4932 | 35742 | False | Siphoviridae | VOG6495, VOG0321, VOG4548, VOG9667, VOG0322, VOG6545, VOG10557, VOG4632, VOG4609, VOG0327, VOG3643, VOG4673, VOG6154, VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917 |
| OKPHNMAL_16 | 1846 | 12954 | False | Siphoviridae | VOG1887, VOG3434, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG0198, VOG1049 |
Phigaro v2.4.0 (Database: Jan. 2024 release)