Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NOOBHDBC_144 | 5684 | 6388 | WalR | 8.38e-114 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| NOOBHDBC_81 | 3798 | 3995 | CspR | 5.18e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NOOBHDBC_1 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_2 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_3 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_4 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_5 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_6 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_7 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_8 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_9 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_10 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_11 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_12 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_13 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_14 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_15 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_16 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_17 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_18 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_19 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_20 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_21 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_22 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_23 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_24 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_26 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_27 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_28 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_29 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_30 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_31 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_32 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_33 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_34 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_35 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_36 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_37 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_38 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_39 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_41 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_42 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_43 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_44 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_45 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_46 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_47 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_49 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_50 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_51 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_52 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_53 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_54 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_55 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_56 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_57 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_58 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_59 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_66 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_77 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_80 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_81 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_82 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_83 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_84 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_85 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_86 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_87 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_88 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_89 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_90 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_91 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_92 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_93 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_94 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_95 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_96 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_97 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_98 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_99 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_100 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_101 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_102 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_103 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_104 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_105 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_106 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_107 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_108 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_109 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_110 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_111 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_112 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_113 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_114 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_115 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_116 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_117 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_118 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_119 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_120 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_121 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_122 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_123 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_124 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_125 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_126 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_127 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_128 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_129 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_130 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_131 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_132 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_133 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_134 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_135 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_136 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_137 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_138 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_139 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_140 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_141 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_142 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_143 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_144 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_145 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_146 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_147 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_148 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_149 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_150 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_151 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_152 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_153 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_154 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_155 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_156 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_157 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_158 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_159 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_160 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_161 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_162 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_163 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_164 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_165 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_166 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_167 | 1.0 | 0.0 | 1.0 |
| NOOBHDBC_168 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_169 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_170 | 0.0 | 1.0 | 0.0 |
| NOOBHDBC_171 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NOOBHDBC_44 | 3746 | 12891 | False | Siphoviridae | VOG1581, VOG4632, VOG4606, VOG0205, VOG4581, VOG4544, VOG4556 |
| NOOBHDBC_86 | 3861 | 32624 | False | Siphoviridae | VOG6495, VOG11003, VOG9155, VOG10059, VOG0181, VOG10867, VOG6450, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG5998, VOG6795, VOG5562, VOG0198, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG5793, VOG4633 |
| NOOBHDBC_92 | 1949 | 26617 | False | Siphoviridae | VOG7017, VOG0861, VOG4705, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG9975, VOG4553, VOG4573, VOG4556, VOG1886, VOG4581, VOG4841, VOG1345, VOG4549, VOG4570, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)