Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CMMBOAPI_38 | 10633 | 10436 | CspA | 7.70e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| CMMBOAPI_38 | 10633 | 10436 | CspR | 8.09e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CMMBOAPI_1 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_3 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_4 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_6 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_7 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_8 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_9 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_10 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_11 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_12 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_13 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_14 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_15 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_16 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_17 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_18 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_19 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_22 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_33 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_36 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_37 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_38 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_39 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_40 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_41 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_42 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_43 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_44 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_45 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_46 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_47 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_48 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_49 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_50 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_51 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_52 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_53 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_54 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_55 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_56 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_57 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_58 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_59 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_60 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_61 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_62 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_63 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_64 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_65 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_66 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_67 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_68 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_69 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_70 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_71 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_72 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_73 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_74 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_75 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_76 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_77 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_78 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_79 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_80 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_81 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_82 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_83 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_84 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_85 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_86 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_87 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_88 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_89 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_90 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_91 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_92 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_93 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_94 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_95 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_96 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_97 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_98 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_99 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_100 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_101 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_102 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_103 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_104 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_105 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_106 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_107 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_108 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_109 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_110 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_111 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_112 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_113 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_114 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_115 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_116 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_117 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_118 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_119 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_120 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_121 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_122 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_123 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_124 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_125 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_126 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_127 | 1.0 | 0.0 | 1.0 |
| CMMBOAPI_128 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_129 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_130 | 0.0 | 1.0 | 0.0 |
| CMMBOAPI_131 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CMMBOAPI_43 | 75000 | 111302 | False | Siphoviridae | VOG5897, VOG5361, VOG4824, VOG0703, VOG1637, VOG4705, VOG4334, VOG4856, VOG3462, VOG0801, VOG6163, VOG0209, VOG4586, VOG0207, VOG4317, VOG0205, VOG0204, VOG4568, VOG4556, VOG10142, VOG1886, VOG4581, VOG4841, VOG0198, VOG3307, VOG8685, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0535 |
| CMMBOAPI_87 | 15316 | 56152 | False | Siphoviridae | VOG4615, VOG0703, VOG9091, VOG8917, VOG10223, VOG4856, VOG2037, VOG9997, VOG10972, VOG3462, VOG0801, VOG8263, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG4841, VOG4571, VOG0822, VOG0198, VOG0536, VOG10631, VOG8685, VOG0189, VOG8647, VOG0514, VOG6545, VOG0322, VOG0535, VOG2228 |
Phigaro v2.4.0 (Database: Jan. 2024 release)