Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MENPMLDG_152 | 11286 | 13211 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MENPMLDG_152 | 11286 | 13211 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MENPMLDG_132 | 14228 | 15133 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| MENPMLDG_152 | 11289 | 13211 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MENPMLDG_107 | 158084 | 159214 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.80 | 69.17 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MENPMLDG_22 | 1442 | 2121 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MENPMLDG_1 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_2 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_3 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_4 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_5 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_6 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_7 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_8 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_9 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_10 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_11 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_12 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_13 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_15 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_16 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_18 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_19 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_20 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_21 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_22 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_23 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_24 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_25 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_26 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_27 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_28 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_29 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_30 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_31 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_32 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_33 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_34 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_35 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_36 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_37 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_38 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_39 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_40 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_41 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_42 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_43 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_44 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_45 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_46 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_48 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_49 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_50 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_51 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_52 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_53 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_54 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_57 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_68 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_79 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_83 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_84 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_85 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_86 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_87 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_88 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_89 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_90 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_91 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_92 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_93 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_94 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_95 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_96 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_97 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_98 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_99 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_100 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_101 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_102 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_103 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_104 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_105 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_106 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_107 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_108 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_109 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_110 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_111 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_112 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_113 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_114 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_115 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_116 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_117 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_118 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_119 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_120 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_121 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_122 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_123 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_124 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_125 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_126 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_127 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_128 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_129 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_130 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_131 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_132 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_133 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_134 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_135 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_136 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_137 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_138 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_139 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_140 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_141 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_142 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_143 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_144 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_145 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_146 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_147 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_148 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_149 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_150 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_151 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_152 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_153 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_154 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_155 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_156 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_157 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_158 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_159 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_160 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_161 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_162 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_163 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_164 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_165 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_166 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_167 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_168 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_169 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_170 | 1.0 | 0.0 | 1.0 |
| MENPMLDG_171 | 0.0 | 1.0 | 0.0 |
| MENPMLDG_172 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)