safety

PPRS ARGs VFs PGs Plasmid Prophage IS elements

ARGs	VFs	PGs	PPRS
5	0	0	5.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
CJEFAIMO_50	48995	49885	CblA-1	ARO:3002999	CblA-1	99.32	100.00	GQ343019.1
CJEFAIMO_14	41775	43749	tet(Q)	ARO:3000191	tet(Q)	100.00	97.56	Z21523.1
CJEFAIMO_51	6798	8003	Mef(En2)	ARO:3004659	Mef(En2)	99.50	100.00	AF251288.1
CJEFAIMO_5	706	2631	tet(Q)	ARO:3000191	tet(Q)	89.08	97.56	Z21523.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
CJEFAIMO_14	41823	43748	tet(Q)	Doxycycline, Tetracycline, Minocycline	100.00	100.00	Z21523

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
CJEFAIMO_51	8028	8537	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	EXACTX	100.00	100.00	WP_004308783.1
CJEFAIMO_14	41823	43745	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	EXACTX	100.00	100.00	WP_002560998.1
CJEFAIMO_51	6798	8000	mef(En2)	macrolide efflux MFS transporter Mef(En2)	BLASTX	99.50	100.00	WP_063853729.1
CJEFAIMO_50	48995	49882	cblA	CblA family class A beta-lactamase	BLASTX	99.32	100.00	WP_005827792.1
CJEFAIMO_5	706	2628	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	BLASTX	89.55	100.00	WP_063856407.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
CJEFAIMO_1	0.0	1.0	0.0
CJEFAIMO_2	0.0	1.0	0.0
CJEFAIMO_3	0.0	1.0	0.0
CJEFAIMO_4	0.0	1.0	0.0
CJEFAIMO_5	0.0	1.0	0.0
CJEFAIMO_6	0.0	1.0	0.0
CJEFAIMO_7	0.0	1.0	0.0
CJEFAIMO_8	0.0	1.0	0.0
CJEFAIMO_9	0.0	1.0	0.0
CJEFAIMO_10	0.0	1.0	0.0
CJEFAIMO_11	0.0	1.0	0.0
CJEFAIMO_12	0.0	1.0	0.0
CJEFAIMO_13	0.0	1.0	0.0
CJEFAIMO_14	0.0	1.0	0.0
CJEFAIMO_15	0.0	1.0	0.0
CJEFAIMO_16	0.0	1.0	0.0
CJEFAIMO_17	0.0	1.0	0.0
CJEFAIMO_18	0.0	1.0	0.0
CJEFAIMO_19	0.0	1.0	0.0
CJEFAIMO_20	1.0	0.0	1.0
CJEFAIMO_21	1.0	0.0	1.0
CJEFAIMO_22	0.0	1.0	0.0
CJEFAIMO_23	0.0	1.0	0.0
CJEFAIMO_24	1.0	0.0	1.0
CJEFAIMO_25	0.0	1.0	0.0
CJEFAIMO_26	0.0	1.0	0.0
CJEFAIMO_27	0.0	1.0	0.0
CJEFAIMO_28	0.0	1.0	0.0
CJEFAIMO_29	0.0	1.0	0.0
CJEFAIMO_30	1.0	0.0	1.0
CJEFAIMO_31	0.0	1.0	0.0
CJEFAIMO_32	1.0	0.0	1.0
CJEFAIMO_33	1.0	0.0	1.0
CJEFAIMO_34	0.0	1.0	0.0
CJEFAIMO_35	1.0	0.0	1.0
CJEFAIMO_37	1.0	0.0	1.0
CJEFAIMO_38	0.0	1.0	0.0
CJEFAIMO_39	1.0	0.0	1.0
CJEFAIMO_40	1.0	0.0	1.0
CJEFAIMO_41	1.0	0.0	1.0
CJEFAIMO_42	1.0	0.0	1.0
CJEFAIMO_43	1.0	0.0	1.0
CJEFAIMO_44	1.0	0.0	1.0
CJEFAIMO_45	0.0	1.0	0.0
CJEFAIMO_50	0.0	1.0	0.0
CJEFAIMO_51	0.0	1.0	0.0
CJEFAIMO_52	0.0	1.0	0.0
CJEFAIMO_53	0.0	1.0	0.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
No hit found

Phigaro v2.4.0 (Database: Jan. 2024 release)