Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| INGLKMCC_162 | 125041 | 126966 | tet(Q) | ARO:3000191 | tet(Q) | 98.75 | 97.56 | Z21523.1 |
| INGLKMCC_90 | 88195 | 88995 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| INGLKMCC_90 | 88195 | 88995 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| INGLKMCC_162 | 125041 | 126966 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.01 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| INGLKMCC_90 | 88195 | 88992 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| INGLKMCC_162 | 125044 | 126966 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| INGLKMCC_1 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_2 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_3 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_4 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_5 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_6 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_7 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_8 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_9 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_10 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_11 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_12 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_13 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_14 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_15 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_16 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_17 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_18 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_19 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_20 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_21 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_22 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_23 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_24 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_25 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_26 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_27 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_28 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_29 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_30 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_31 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_32 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_33 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_34 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_35 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_36 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_37 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_38 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_40 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_41 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_43 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_46 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_57 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_68 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_79 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_83 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_84 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_85 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_86 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_87 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_88 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_89 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_90 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_91 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_92 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_93 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_94 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_95 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_96 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_97 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_98 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_99 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_100 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_101 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_102 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_103 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_104 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_105 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_106 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_107 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_108 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_109 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_110 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_111 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_112 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_113 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_114 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_115 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_116 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_117 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_118 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_119 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_120 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_121 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_122 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_123 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_124 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_125 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_126 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_127 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_128 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_129 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_130 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_131 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_132 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_133 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_134 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_135 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_136 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_137 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_138 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_139 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_140 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_141 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_142 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_143 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_144 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_145 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_146 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_147 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_148 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_149 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_150 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_151 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_152 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_153 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_154 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_155 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_156 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_157 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_158 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_159 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_160 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_161 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_162 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_163 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_164 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_165 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_166 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_167 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_168 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_169 | 0.0 | 1.0 | 0.0 |
| INGLKMCC_171 | 1.0 | 0.0 | 1.0 |
| INGLKMCC_172 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| INGLKMCC_85 | 181459 | 191710 | False | Unknown | VOG1198, |
| INGLKMCC_135 | 6059 | 8442 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)