Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HHJEEDLC_7 | 110 | 757 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.38 | 80.90 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HHJEEDLC_7 | 110 | 754 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 98.60 | 80.83 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HHJEEDLC_1 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_2 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_3 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_4 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_5 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_6 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_7 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_8 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_9 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_10 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_12 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_13 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_14 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_15 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_16 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_17 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_18 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_19 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_20 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_21 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_22 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_23 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_24 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_25 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_26 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_27 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_28 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_29 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_30 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_31 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_32 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_33 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_34 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_35 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_36 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_37 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_38 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_39 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_40 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_41 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_42 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_43 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_44 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_45 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_46 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_47 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_48 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_49 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_50 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_51 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_52 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_53 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_54 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_55 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_56 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_57 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_58 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_59 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_60 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_61 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_68 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_75 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_76 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_77 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_78 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_79 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_80 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_81 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_82 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_83 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_84 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_85 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_86 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_87 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_88 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_89 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_90 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_91 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_92 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_93 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_94 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_95 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_96 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_97 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_98 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_99 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_100 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_101 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_102 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_103 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_104 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_105 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_106 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_107 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_108 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_109 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_110 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_111 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_112 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_113 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_114 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_115 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_116 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_117 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_118 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_119 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_120 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_121 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_122 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_123 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_124 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_125 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_126 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_127 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_128 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_129 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_130 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_131 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_132 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_133 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_134 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_135 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_136 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_137 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_138 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_139 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_140 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_141 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_142 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_143 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_144 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_145 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_146 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_147 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_148 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_149 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_150 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_151 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_152 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_153 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_154 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_155 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_156 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_157 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_158 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_159 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_160 | 1.0 | 0.0 | 1.0 |
| HHJEEDLC_161 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_162 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_163 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_164 | 0.0 | 1.0 | 0.0 |
| HHJEEDLC_165 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HHJEEDLC_121 | 10829 | 14487 | True | Unknown | VOG4341, |
Phigaro v2.4.0 (Database: Jan. 2024 release)