Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DJLDIJEN_73 | 15103 | 17076 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
| DJLDIJEN_65 | 2880 | 3770 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
| DJLDIJEN_4 | 1112 | 1903 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 95.99 | JN086160.1 |
| DJLDIJEN_4 | 110 | 910 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DJLDIJEN_4 | 1112 | 1935 | blaOXA-347 | Unknown Beta-lactam | 99.88 | 99.88 | ACWG01000053 |
| DJLDIJEN_73 | 15151 | 17076 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| DJLDIJEN_4 | 110 | 910 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DJLDIJEN_65 | 2883 | 3770 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| DJLDIJEN_4 | 1115 | 1933 | blaOXA | class D beta-lactamase | BLASTX | 99.63 | 99.64 | WP_004295324.1 |
| DJLDIJEN_73 | 15151 | 17073 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| DJLDIJEN_4 | 110 | 907 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DJLDIJEN_115 | 1441 | 2120 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DJLDIJEN_1 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_2 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_3 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_4 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_5 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_6 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_7 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_8 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_9 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_10 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_11 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_12 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_13 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_14 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_15 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_16 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_17 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_18 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_19 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_24 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_28 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_29 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_30 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_31 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_32 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_33 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_34 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_35 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_36 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_37 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_38 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_39 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_40 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_41 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_42 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_43 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_44 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_45 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_46 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_47 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_48 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_49 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_50 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_51 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_52 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_53 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_54 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_55 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_56 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_57 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_58 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_59 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_60 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_61 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_62 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_63 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_64 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_65 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_66 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_67 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_68 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_69 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_70 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_71 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_72 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_73 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_74 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_75 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_76 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_77 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_78 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_79 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_80 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_81 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_82 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_83 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_84 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_85 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_86 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_87 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_88 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_89 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_90 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_91 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_92 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_93 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_94 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_95 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_96 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_97 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_98 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_99 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_100 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_101 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_103 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_104 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_105 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_106 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_107 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_108 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_109 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_110 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_111 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_112 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_113 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_114 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_115 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_116 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_117 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_118 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_119 | 1.0 | 0.0 | 1.0 |
| DJLDIJEN_120 | 0.0 | 1.0 | 0.0 |
| DJLDIJEN_122 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)