Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EEMEKPPK_59 | 23718 | 23014 | WalR | 1.84e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| EEMEKPPK_49 | 21438 | 21632 | CspR | 3.70e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| EEMEKPPK_49 | 21438 | 21635 | CspA | 5.68e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EEMEKPPK_1 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_2 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_3 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_4 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_5 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_6 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_7 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_8 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_9 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_10 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_11 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_12 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_13 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_14 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_15 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_16 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_17 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_18 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_19 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_20 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_21 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_22 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_24 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_31 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_32 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_33 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_34 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_35 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_36 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_37 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_38 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_39 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_40 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_41 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_42 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_43 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_44 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_45 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_46 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_47 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_48 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_49 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_50 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_51 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_52 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_53 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_54 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_55 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_56 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_57 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_58 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_59 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_60 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_61 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_62 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_63 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_64 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_65 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_66 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_67 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_68 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_69 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_70 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_71 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_72 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_73 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_74 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_75 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_76 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_77 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_78 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_79 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_80 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_81 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_82 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_83 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_84 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_85 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_86 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_87 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_88 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_89 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_90 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_91 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_92 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_93 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_94 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_95 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_96 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_97 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_98 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_99 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_100 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_101 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_102 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_103 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_104 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_105 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_106 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_107 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_108 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_109 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_110 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_111 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_112 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_113 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_114 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_115 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_116 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_117 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_118 | 1.0 | 0.0 | 1.0 |
| EEMEKPPK_119 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_120 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_121 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_122 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_123 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_124 | 0.0 | 1.0 | 0.0 |
| EEMEKPPK_125 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EEMEKPPK_40 | 6345 | 25604 | False | Siphoviridae | VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG0198, VOG4693, VOG4566, VOG0186, VOG1309, VOG7298, VOG0181, VOG6495 |
| EEMEKPPK_40 | 37785 | 45419 | False | Siphoviridae | VOG0198, VOG0204, VOG4553, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841 |
| EEMEKPPK_59 | 21123 | 31299 | False | Siphoviridae | VOG3477, VOG0198, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544 |
Phigaro v2.4.0 (Database: Jan. 2024 release)