Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MEKMKOBB_56 | 191678 | 192478 | ErmF | ARO:3000498 | ErmF | 99.25 | 100.00 | M17124.1 |
| MEKMKOBB_18 | 62571 | 63461 | CblA-1 | ARO:3002999 | CblA-1 | 99.32 | 100.00 | GQ343019.1 |
| MEKMKOBB_61 | 41065 | 42270 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MEKMKOBB_56 | 191678 | 192478 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MEKMKOBB_61 | 42295 | 42804 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| MEKMKOBB_56 | 191681 | 192478 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_002682030.1 |
| MEKMKOBB_61 | 41065 | 42267 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| MEKMKOBB_18 | 62571 | 63458 | cblA | CblA family class A beta-lactamase | BLASTX | 99.32 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MEKMKOBB_47 | 1843 | 2423 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MEKMKOBB_1 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_2 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_3 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_4 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_5 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_6 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_7 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_8 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_9 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_10 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_11 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_12 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_13 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_14 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_15 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_16 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_17 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_18 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_19 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_20 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_21 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_22 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_23 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_24 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_25 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_26 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_27 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_28 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_29 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_30 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_31 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_32 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_33 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_34 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_35 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_36 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_37 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_38 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_39 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_40 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_41 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_42 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_43 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_45 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_46 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_47 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_48 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_49 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_50 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_52 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_53 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_54 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_55 | 1.0 | 0.0 | 1.0 |
| MEKMKOBB_56 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_57 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_61 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_62 | 0.0 | 1.0 | 0.0 |
| MEKMKOBB_63 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)