Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 1 | 0 | 4.12 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JLPOELPL_12 | 1201 | 3126 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| JLPOELPL_12 | 114 | 914 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JLPOELPL_175 | 20878 | 21779 | cepA-29 | Unknown Beta-lactam | 99.67 | 99.89 | U05884 |
| JLPOELPL_12 | 114 | 914 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| JLPOELPL_12 | 1201 | 3126 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JLPOELPL_25 | 253 | 1158 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| JLPOELPL_12 | 114 | 911 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| JLPOELPL_12 | 1201 | 3123 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
| JLPOELPL_175 | 21207 | 21776 | cepA | CepA family extended-spectrum class A beta-lactamase | PARTIALX | 99.47 | 63.33 | WP_005816369.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| JLPOELPL_33 | 4842 | 6035 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| JLPOELPL_33 | 4842 | 6035 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| JLPOELPL_33 | 4842 | 6035 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JLPOELPL_1 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_2 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_3 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_4 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_5 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_6 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_7 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_8 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_9 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_10 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_11 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_12 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_13 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_14 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_15 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_16 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_17 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_18 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_19 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_20 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_21 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_22 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_23 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_24 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_25 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_26 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_27 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_28 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_29 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_30 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_31 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_32 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_33 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_34 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_35 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_36 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_37 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_38 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_39 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_40 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_41 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_43 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_44 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_45 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_46 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_47 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_48 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_49 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_50 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_51 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_52 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_53 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_54 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_55 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_56 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_57 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_58 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_59 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_60 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_61 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_62 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_63 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_64 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_65 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_66 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_67 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_68 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_69 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_70 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_71 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_72 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_73 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_74 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_75 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_76 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_77 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_78 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_79 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_80 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_81 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_82 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_83 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_84 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_85 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_87 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_88 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_89 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_90 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_91 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_92 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_93 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_94 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_95 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_96 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_97 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_98 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_99 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_100 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_101 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_102 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_103 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_104 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_105 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_106 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_107 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_108 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_109 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_110 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_111 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_112 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_113 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_114 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_115 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_124 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_135 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_146 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_155 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_156 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_157 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_158 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_159 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_160 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_161 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_162 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_163 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_164 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_165 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_166 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_167 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_168 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_169 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_170 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_171 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_172 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_173 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_174 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_175 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_176 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_177 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_178 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_179 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_180 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_181 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_182 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_183 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_184 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_185 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_186 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_187 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_188 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_189 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_190 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_191 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_192 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_193 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_194 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_195 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_196 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_197 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_198 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_199 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_200 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_201 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_202 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_203 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_204 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_205 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_206 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_207 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_208 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_209 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_210 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_211 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_212 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_213 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_214 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_215 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_216 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_217 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_218 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_219 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_220 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_221 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_222 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_223 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_224 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_225 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_226 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_227 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_228 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_229 | 1.0 | 0.0 | 1.0 |
| JLPOELPL_230 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_231 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_232 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_233 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_234 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_235 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_236 | 0.0 | 1.0 | 0.0 |
| JLPOELPL_237 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JLPOELPL_155 | 35369 | 44125 | False | Siphoviridae | VOG4581, |
| JLPOELPL_178 | 24699 | 33988 | False | Unknown | VOG0275, |
| JLPOELPL_227 | 80968 | 87884 | False | Myoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)