Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DDBNEGPF_65 | 271 | 1488 | mef(A) | Erythromycin, Azithromycin | 94.83 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DDBNEGPF_65 | 271 | 1491 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.77 | 99.75 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DDBNEGPF_75 | 339 | 1018 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DDBNEGPF_1 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_2 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_3 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_4 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_5 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_6 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_7 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_8 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_9 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_10 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_11 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_12 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_13 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_14 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_15 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_16 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_17 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_18 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_19 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_20 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_21 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_22 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_23 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_24 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_25 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_26 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_27 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_28 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_29 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_30 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_31 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_32 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_33 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_34 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_35 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_36 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_37 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_38 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_39 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_40 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_41 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_42 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_43 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_44 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_45 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_46 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_47 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_48 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_49 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_50 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_51 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_52 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_53 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_54 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_55 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_56 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_57 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_58 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_59 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_60 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_61 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_62 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_63 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_64 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_65 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_66 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_67 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_68 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_69 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_70 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_71 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_72 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_73 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_74 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_75 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_76 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_77 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_78 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_79 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_80 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_81 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_82 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_83 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_84 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_85 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_86 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_87 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_88 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_89 | 0.0 | 1.0 | 0.0 |
| DDBNEGPF_90 | 1.0 | 0.0 | 1.0 |
| DDBNEGPF_91 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DDBNEGPF_23 | 179353 | 189814 | False | Siphoviridae | VOG4841, |
Phigaro v2.4.0 (Database: Jan. 2024 release)