Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OCDEBFIB_2 | 29008 | 27428 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.72 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OCDEBFIB_1 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_2 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_3 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_4 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_5 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_6 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_7 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_8 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_9 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_10 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_11 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_12 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_13 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_14 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_15 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_16 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_17 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_18 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_19 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_20 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_21 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_22 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_23 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_24 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_25 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_26 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_27 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_28 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_29 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_30 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_31 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_32 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_33 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_34 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_35 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_36 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_37 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_38 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_39 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_40 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_41 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_42 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_43 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_44 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_45 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_46 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_47 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_48 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_49 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_50 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_51 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_52 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_53 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_54 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_55 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_56 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_57 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_58 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_59 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_60 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_61 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_62 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_63 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_64 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_65 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_66 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_67 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_68 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_69 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_70 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_71 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_72 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_73 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_74 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_75 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_76 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_77 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_78 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_79 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_80 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_81 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_82 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_83 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_84 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_85 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_86 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_87 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_88 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_89 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_90 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_91 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_92 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_93 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_94 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_95 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_96 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_97 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_98 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_99 | 1.0 | 0.0 | 1.0 |
| OCDEBFIB_100 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_101 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_102 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_103 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_104 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_105 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_106 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_107 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_108 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_109 | 0.0 | 1.0 | 0.0 |
| OCDEBFIB_110 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OCDEBFIB_86 | 26581 | 38650 | False | Siphoviridae | VOG0327, |
Phigaro v2.4.0 (Database: Jan. 2024 release)