Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MMDKHPDO_46 | 17515 | 18405 | CblA-1 | ARO:3002999 | CblA-1 | 98.99 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MMDKHPDO_46 | 17518 | 18405 | cblA | CblA family class A beta-lactamase | BLASTX | 98.99 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MMDKHPDO_1 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_2 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_3 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_4 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_5 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_6 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_7 | 1.0 | 0.0 | 1.0 |
| MMDKHPDO_8 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_9 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_10 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_11 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_12 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_13 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_14 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_15 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_16 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_17 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_18 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_19 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_20 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_21 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_22 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_23 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_24 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_25 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_26 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_27 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_28 | 1.0 | 0.0 | 1.0 |
| MMDKHPDO_29 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_30 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_31 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_32 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_33 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_34 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_35 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_36 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_37 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_38 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_39 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_40 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_41 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_42 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_43 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_44 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_45 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_46 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_47 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_48 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_49 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_50 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_51 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_52 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_53 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_54 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_55 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_56 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_57 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_58 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_59 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_60 | 0.0 | 1.0 | 0.0 |
| MMDKHPDO_61 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MMDKHPDO_9 | 17355 | 26551 | False | Unknown | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)