Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NDEJPOJN_65 | 27195 | 26491 | WalR | 3.61e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| NDEJPOJN_222 | 13765 | 13962 | CspR | 3.17e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
| NDEJPOJN_79 | 3 | 569 | malM | 3.30e-97 | regulatory protein | 80.95 | 61.44 | AAB59059 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NDEJPOJN_1 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_2 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_4 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_5 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_6 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_7 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_8 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_9 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_10 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_11 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_12 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_13 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_14 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_15 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_16 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_17 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_18 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_19 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_20 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_21 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_22 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_24 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_25 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_26 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_28 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_29 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_30 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_31 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_32 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_33 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_34 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_35 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_37 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_44 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_54 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_65 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_76 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_87 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_98 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_109 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_110 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_120 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_131 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_142 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_153 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_161 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_162 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_163 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_164 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_165 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_166 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_167 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_168 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_169 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_170 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_171 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_172 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_173 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_174 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_175 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_176 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_177 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_178 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_179 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_180 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_181 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_182 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_183 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_184 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_185 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_186 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_187 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_188 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_189 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_190 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_191 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_192 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_193 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_194 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_195 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_196 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_197 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_198 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_199 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_200 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_201 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_202 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_203 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_204 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_205 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_206 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_207 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_208 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_209 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_210 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_211 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_212 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_213 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_214 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_215 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_216 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_217 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_218 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_219 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_220 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_221 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_222 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_223 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_224 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_225 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_226 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_227 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_228 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_229 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_230 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_231 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_232 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_233 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_234 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_235 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_236 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_237 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_238 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_239 | 0.0 | 1.0 | 0.0 |
| NDEJPOJN_240 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_241 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_242 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_243 | 1.0 | 0.0 | 1.0 |
| NDEJPOJN_244 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NDEJPOJN_167 | 95981 | 166267 | True | Siphoviridae | VOG0703, VOG1637, VOG7896, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG7540, VOG1886, VOG4581, VOG4841, VOG1345, VOG10904, VOG4570, VOG0198, VOG1563, VOG3307, VOG0044, VOG3643, VOG2820, VOG3307, VOG0195, VOG9759, VOG0327, VOG4606, VOG5126, VOG6545, VOG4548, VOG6394, VOG0322, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG9846, VOG5353, VOG8520, VOG0862, VOG9859, VOG0275, VOG0275, VOG2233, VOG0705, VOG3594, VOG9667, VOG4649, VOG0054, VOG1637, VOG0648, VOG3498, VOG4763, VOG4633, VOG4545, VOG1898, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG0519 |
| NDEJPOJN_233 | 44182 | 54149 | False | Siphoviridae | VOG1581, VOG4632, VOG4609, VOG4581, VOG4544, VOG1886, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
Phigaro v2.4.0 (Database: Jan. 2024 release)