Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EDABMJEM_134 | 134750 | 133170 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EDABMJEM_1 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_2 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_3 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_4 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_5 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_11 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_22 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_33 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_39 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_40 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_41 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_42 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_43 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_44 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_45 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_46 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_47 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_48 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_49 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_50 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_51 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_52 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_53 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_54 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_55 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_56 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_57 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_58 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_59 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_60 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_61 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_62 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_63 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_64 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_65 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_66 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_67 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_68 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_69 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_70 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_71 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_72 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_73 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_74 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_75 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_76 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_77 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_78 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_79 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_80 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_81 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_82 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_83 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_84 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_85 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_86 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_87 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_88 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_89 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_90 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_91 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_92 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_93 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_94 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_95 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_96 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_97 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_98 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_99 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_100 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_101 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_102 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_103 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_104 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_105 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_106 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_108 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_109 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_110 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_111 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_112 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_113 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_114 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_115 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_116 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_117 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_118 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_119 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_121 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_122 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_123 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_124 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_125 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_126 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_127 | 1.0 | 0.0 | 1.0 |
| EDABMJEM_128 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_129 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_130 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_131 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_132 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_133 | 0.0 | 1.0 | 0.0 |
| EDABMJEM_134 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EDABMJEM_63 | 38437 | 53180 | False | Siphoviridae | VOG5096, |
Phigaro v2.4.0 (Database: Jan. 2024 release)