Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NJGMLDGD_98 | 42518 | 41814 | WalR | 4.82e-112 | transcriptional regulatory protein | 82.98 | 100.00 | EPH95667 |
| NJGMLDGD_49 | 9452 | 9649 | CspR | 3.87e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NJGMLDGD_1 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_2 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_3 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_4 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_5 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_6 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_7 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_8 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_9 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_10 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_11 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_12 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_13 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_15 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_16 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_17 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_18 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_19 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_20 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_21 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_22 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_23 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_24 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_25 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_26 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_27 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_28 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_29 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_30 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_31 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_32 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_33 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_35 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_36 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_37 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_38 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_39 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_40 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_41 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_43 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_44 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_45 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_46 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_47 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_48 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_49 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_50 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_51 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_52 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_53 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_54 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_55 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_56 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_57 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_58 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_59 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_60 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_61 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_62 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_63 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_64 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_65 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_66 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_67 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_68 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_69 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_70 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_71 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_72 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_73 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_74 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_75 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_76 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_77 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_78 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_79 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_80 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_82 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_83 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_84 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_85 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_86 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_88 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_89 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_90 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_91 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_92 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_93 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_94 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_95 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_96 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_97 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_98 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_99 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_100 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_101 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_102 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_104 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_105 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_106 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_107 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_108 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_109 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_110 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_111 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_112 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_113 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_115 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_116 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_118 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_119 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_123 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_124 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_127 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_128 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_129 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_130 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_131 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_132 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_133 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_134 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_135 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_136 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_139 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_141 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_142 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_143 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_145 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_146 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_147 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_149 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_150 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_151 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_152 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_153 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_154 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_155 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_156 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_157 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_158 | 0.0 | 1.0 | 0.0 |
| NJGMLDGD_161 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_162 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_163 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_164 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_165 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_168 | 1.0 | 0.0 | 1.0 |
| NJGMLDGD_169 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NJGMLDGD_38 | 194087 | 197169 | False | Siphoviridae | VOG0204, VOG4568 |
| NJGMLDGD_51 | 5026 | 41446 | False | Siphoviridae | VOG1333, VOG4965, VOG8241, VOG0685, VOG4566, VOG0189, VOG4688, VOG6623, VOG4693, VOG9741, VOG0195, VOG0152, VOG3307, VOG3643, VOG3643, VOG6303, VOG0044, VOG0198, VOG4892, VOG4683, VOG4570, VOG0796, VOG4544, VOG0720, VOG4564, VOG5616, VOG1300, VOG1183, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054 |
Phigaro v2.4.0 (Database: Jan. 2024 release)