Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BABNMBDO_90 | 6264 | 5560 | WalR | 4.60e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BABNMBDO_44 | 9662 | 9859 | CspR | 3.14e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BABNMBDO_119 | 1050 | 2111 | repUS74 | 1062 / 1062 | 98.87 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BABNMBDO_1 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_2 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_3 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_4 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_5 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_6 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_8 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_9 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_10 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_11 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_12 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_13 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_14 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_15 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_16 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_17 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_18 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_19 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_20 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_21 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_22 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_23 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_24 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_25 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_26 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_27 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_29 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_30 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_31 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_32 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_33 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_34 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_35 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_36 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_37 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_38 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_39 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_40 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_41 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_42 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_43 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_44 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_45 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_47 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_48 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_49 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_50 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_51 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_52 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_53 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_54 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_55 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_56 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_57 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_58 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_59 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_60 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_62 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_63 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_64 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_65 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_66 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_67 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_68 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_69 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_70 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_71 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_72 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_74 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_75 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_76 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_77 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_78 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_79 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_80 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_81 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_82 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_83 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_84 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_85 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_86 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_87 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_88 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_89 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_90 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_91 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_92 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_93 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_94 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_95 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_96 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_97 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_98 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_99 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_100 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_101 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_103 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_104 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_106 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_107 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_109 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_110 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_114 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_115 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_116 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_117 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_119 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_120 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_125 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_126 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_127 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_129 | 0.0 | 1.0 | 0.0 |
| BABNMBDO_132 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_134 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_135 | 1.0 | 0.0 | 1.0 |
| BABNMBDO_136 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BABNMBDO_30 | 16962 | 37063 | False | Siphoviridae | VOG6422, VOG9859, VOG0862, VOG8520, VOG5353, VOG10059, VOG0181, VOG10867, VOG6450, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG5998, VOG6795, VOG5562, VOG0198, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573 |
| BABNMBDO_32 | 2327 | 15688 | False | Siphoviridae | VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637, VOG0054, VOG0703 |
| BABNMBDO_51 | 16294 | 55341 | False | Siphoviridae | VOG7656, VOG4649, VOG0602, VOG7017, VOG0861, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG10303, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG1345, VOG6947, VOG4549, VOG5821, VOG4570, VOG0198, VOG1563, VOG10584, VOG3643, VOG4039, VOG2820, VOG0195, VOG9741, VOG4693, VOG7735, VOG0025, VOG4799, VOG6179, VOG10867, VOG0181, VOG0571, VOG11003 |
| BABNMBDO_57 | 1 | 28048 | False | Siphoviridae | VOG4599, VOG4605, VOG6163, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG1183, VOG1300, VOG4564, VOG0720, VOG4544, VOG0796, VOG4570, VOG0198, VOG2338, VOG0044, VOG7441, VOG3643, VOG3643, VOG0152, VOG4693, VOG6623, VOG9860, VOG11003, VOG0226, VOG4566 |
Phigaro v2.4.0 (Database: Jan. 2024 release)