Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DJJIEMCC_104 | 24021 | 23317 | WalR | 4.39e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| DJJIEMCC_51 | 18113 | 18310 | CspR | 1.04e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DJJIEMCC_107 | 19099 | 20157 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DJJIEMCC_1 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_2 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_3 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_4 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_5 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_6 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_7 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_8 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_9 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_10 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_11 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_12 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_13 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_14 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_15 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_16 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_17 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_18 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_19 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_20 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_21 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_22 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_23 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_24 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_25 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_26 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_27 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_28 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_29 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_30 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_31 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_32 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_33 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_34 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_35 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_36 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_37 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_38 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_39 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_41 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_42 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_43 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_44 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_45 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_46 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_47 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_48 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_49 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_50 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_51 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_52 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_53 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_54 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_55 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_56 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_58 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_59 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_60 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_61 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_62 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_63 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_64 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_65 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_66 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_67 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_68 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_69 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_70 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_71 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_72 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_73 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_74 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_75 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_76 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_77 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_78 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_79 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_80 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_81 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_82 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_85 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_86 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_87 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_88 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_89 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_90 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_91 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_92 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_94 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_95 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_96 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_97 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_99 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_100 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_102 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_103 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_104 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_105 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_106 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_107 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_108 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_109 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_110 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_111 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_112 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_113 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_114 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_115 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_116 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_120 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_121 | 0.0 | 1.0 | 0.0 |
| DJJIEMCC_123 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_125 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_126 | 1.0 | 0.0 | 1.0 |
| DJJIEMCC_127 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DJJIEMCC_44 | 16540 | 24682 | False | Siphoviridae | VOG4602, VOG6495, VOG5353, VOG4552, VOG0181, VOG10867, VOG4799, VOG0025, VOG7735, VOG4693, VOG9671 |
| DJJIEMCC_45 | 1422 | 19135 | False | Siphoviridae | VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637 |
| DJJIEMCC_56 | 6100 | 16791 | False | Siphoviridae | VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0195, VOG4841 |
| DJJIEMCC_78 | 1 | 27959 | False | Siphoviridae | VOG0727, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG0637, VOG4564, VOG0720, VOG4544, VOG0796, VOG4570, VOG6579, VOG0198, VOG1563, VOG3307, VOG0044, VOG0102, VOG3643, VOG10148, VOG0152, VOG9741, VOG0536, VOG9860, VOG11003, VOG10904, VOG0226, VOG4566, VOG0186, VOG1309 |
Phigaro v2.4.0 (Database: Jan. 2024 release)